RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 EMX1Q04741 257 aaPredicted RBP10.47□□□□□ -0.73
CLIP4-204ENST00000404424 ITGADQ13349 1161 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 CHRNA6Q15825 494 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 CPSF6Q16630 551 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLIP4-204ENST00000404424 ANKRD34AQ69YU3 496 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 SERPINA11Q86U17 422 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 IGFN1Q86VF2 1251 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 NPAS4Q8IUM7 802 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 CLHC1Q8NHS4 586 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 RORBQ92753 470 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 WBP2Q969T9 261 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 TRMT2BQ96GJ1 504 aaKnown RBP10.47□□□□□ -0.73
CLIP4-204ENST00000404424 C2orf49Q9BVC5 232 aaPredicted RBP10.47□□□□□ -0.73
CLIP4-204ENST00000404424 CCDC90BQ9GZT6 254 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 TM9SF3Q9HD45 589 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 IL1RAPQ9NPH3 570 aa10.47□□□□□ -0.73
CLIP4-204ENST00000404424 PAK1IP1Q9NWT1 392 aaPredicted RBP10.47□□□□□ -0.73
CLIP4-204ENST00000404424 PLXNA4Q9HCM2 1894 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 EVPLLA8MZ36 301 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 INMTO95050 263 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 SELPP16109 830 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 PTPN6P29350 595 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 HNF1BP35680 557 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 TRPC1P48995 793 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 PSMD7P51665 324 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 MLLT10P55197 1068 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 PPP1R8Q12972 351 aaKnown RBP10.46□□□□□ -0.73
CLIP4-204ENST00000404424 ABRQ12979 859 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 CDH18Q13634 790 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 RAPSNQ13702 412 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 ATP1A4Q13733 1029 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 BOP1Q14137 746 aaKnown RBP10.46□□□□□ -0.73
CLIP4-204ENST00000404424 TAF12Q16514 161 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 OR2T5Q6IEZ7 315 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 CAPN13Q6MZZ7 669 aaPredicted RBP10.46□□□□□ -0.73
CLIP4-204ENST00000404424 METTL3Q86U44 580 aaKnown RBP10.46□□□□□ -0.73
CLIP4-204ENST00000404424 TMEM173Q86WV6 379 aaPredicted RBP10.46□□□□□ -0.73
CLIP4-204ENST00000404424 SLC43A3Q8NBI5 491 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 DBF4BQ8NFT6 615 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 OR2T29Q8NH02 315 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 FAR1Q8WVX9 515 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 MTFMTQ96DP5 389 aaKnown RBP10.46□□□□□ -0.73
CLIP4-204ENST00000404424 MAGEB10Q96LZ2 347 aaPredicted RBP10.46□□□□□ -0.73
CLIP4-204ENST00000404424 HHIPQ96QV1 700 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 TM6SF2Q9BZW4 377 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 ELOVL6Q9H5J4 265 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 ARL15Q9NXU5 204 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 SCN3BQ9NY72 215 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 HCSTQ9UBK5 93 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 DLGAP4Q9Y2H0 992 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 U3KQV3 271 aa10.46□□□□□ -0.73
CLIP4-204ENST00000404424 C2orf78A6NCI8 922 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 TMEM88BA6NKF7 163 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 ARVCFO00192 962 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 RFXANKO14593 260 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 FUCA1P04066 466 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 ACVR2AP27037 513 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 OPRL1P41146 370 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 HNMTP50135 292 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 PIGFQ07326 219 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 KDM4DQ6B0I6 523 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 ERICH5Q6P6B1 374 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 TPGS1Q6ZTW0 290 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 NEK10Q6ZWH5 1172 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 SAPCD2Q86UD0 394 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 TRIM74Q86UV6 250 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 TRIM73Q86UV7 250 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 TMCO5AQ8N6Q1 288 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 PAF1Q8N7H5 531 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 L3MBTL4Q8NA19 623 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 TTC16Q8NEE8 873 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 OR7A2PQ8NGA2 310 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 MCOLN3Q8TDD5 553 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 ITPKCQ96DU7 683 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 LYSMD1Q96S90 227 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 DUSP21Q9H596 190 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 ZDHHC3Q9NYG2 299 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 RPS6KA6Q9UK32 745 aa10.46□□□□□ -0.74
CLIP4-204ENST00000404424 INTS6Q9UL03 887 aaKnown RBP10.46□□□□□ -0.74
CLIP4-204ENST00000404424 ZNF106Q9H2Y7 1883 aaKnown RBP10.45□□□□□ -0.74
CLIP4-204ENST00000404424 KCNE1BA0A087WTH5 132 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 BOLA2-SMG1P6H3BVE0 249 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 GFRA2O00451 464 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 FTH1P02794 183 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 C8GP07360 202 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 MYCLP1P12525 358 aaPredicted RBP10.45□□□□□ -0.74
CLIP4-204ENST00000404424 EPORP19235 508 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 CDH3P22223 829 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 DNAJA1P31689 397 aaKnown RBP10.45□□□□□ -0.74
CLIP4-204ENST00000404424 SLC35A2P78381 396 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 SMAD3P84022 425 aaKnown RBP10.45□□□□□ -0.74
CLIP4-204ENST00000404424 MVKQ03426 396 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 CBX3Q13185 183 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 NPTX1Q15818 432 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 CYP4Z1Q86W10 505 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 C10orf111Q8N326 155 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 MINDY2Q8NBR6 621 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 CNIH3Q8TBE1 160 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 CSGALNACT1Q8TDX6 532 aa10.45□□□□□ -0.74
CLIP4-204ENST00000404424 BCL7CQ8WUZ0 217 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms