RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 CATP04040 527 aaKnown RBP17.39■□□□□ 0.37
CHTOP-205ENST00000403433 ACPPP15309 386 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 SDC1P18827 310 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 GSTT1P30711 240 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 CTSCP53634 463 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 IRF8Q02556 426 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 CAMK1Q14012 370 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 GRIN2CQ14957 1233 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 RUNDC3AQ59EK9 446 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 LIPJQ5W064 366 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 SLC30A9Q6PML9 568 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 C12orf40Q86WS4 652 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 MSRB3Q8IXL7 192 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 FAM47BQ8NA70 645 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 ZNF548Q8NEK5 533 aaPredicted RBP17.39■□□□□ 0.37
CHTOP-205ENST00000403433 TSPAN14Q8NG11 270 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 ZNF707Q96C28 371 aaPredicted RBP17.39■□□□□ 0.37
CHTOP-205ENST00000403433 RMND5BQ96G75 393 aaPredicted RBP17.39■□□□□ 0.37
CHTOP-205ENST00000403433 ITCHQ96J02 903 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 LRRC3BQ96PB8 259 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 TSSK3Q96PN8 268 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 CCM2Q9BSQ5 444 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 WRAP53Q9BUR4 548 aaKnown RBP17.39■□□□□ 0.37
CHTOP-205ENST00000403433 OSBPL6Q9BZF3 934 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 GORASP2Q9H8Y8 452 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 INVSQ9Y283 1065 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 MKI67P46013 3256 aaKnown RBP17.39■□□□□ 0.37
CHTOP-205ENST00000403433 A0A096LPI6 279 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 NPIPB8E9PQR5 432 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 PSMD11O00231 422 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 DLGAP1O14490 977 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 PRNPP04156 253 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 POU2F2P09086 479 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 RAP2AP10114 183 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 MAPK9P45984 424 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 PREPP48147 710 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 CHRNB3Q05901 458 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 MERTKQ12866 999 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 NADK2Q4G0N4 442 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.39■□□□□ 0.37
CHTOP-205ENST00000403433 SPRED2Q7Z698 418 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 THOC6Q86W42 341 aaKnown RBP17.39■□□□□ 0.37
CHTOP-205ENST00000403433 RIMKLAQ8IXN7 391 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 TMEM132CQ8N3T6 1108 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 CSGALNACT1Q8TDX6 532 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 HERVK_113Q902F9 699 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 TESCQ96BS2 214 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 APIPQ96GX9 242 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 APOLD1Q96LR9 279 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 TMEM106CQ9BVX2 250 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 UGT2B28Q9BY64 529 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 TRIM4Q9C037 500 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 KCNH6Q9H252 994 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 IKZF5Q9H5V7 419 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 CAAP1Q9H8G2 361 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 SLC27A6Q9Y2P4 619 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 CROCCQ5TZA2 2017 aa17.39■□□□□ 0.37
CHTOP-205ENST00000403433 ELOVL7A1L3X0 281 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 C5orf67F2Z3F1 127 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 H3BNH8 94 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 PLOD2O00469 737 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 AREL1O15033 823 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 PRAMEF4O60810 478 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 DEAF1O75398 565 aaPredicted RBP17.38■□□□□ 0.37
CHTOP-205ENST00000403433 ZNF23P17027 643 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 AMD1P17707 334 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 NELFEP18615 380 aaKnown RBP17.38■□□□□ 0.37
CHTOP-205ENST00000403433 NR1H2P55055 460 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 ZNF33BQ06732 778 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 TMEM115Q12893 351 aaPredicted RBP17.38■□□□□ 0.37
CHTOP-205ENST00000403433 CSTF3Q12996 717 aaKnown RBP17.38■□□□□ 0.37
CHTOP-205ENST00000403433 XKR6Q5GH73 641 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 PRAMEF9Q5VWM5 478 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 METTL25Q8N6Q8 603 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 MED8Q96G25 268 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 CCDC138Q96M89 665 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 FOPNLQ96NB1 174 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 PAIP1Q9H074 479 aaKnown RBP17.38■□□□□ 0.37
CHTOP-205ENST00000403433 SMPD3Q9NY59 655 aaPredicted RBP17.38■□□□□ 0.37
CHTOP-205ENST00000403433 MAN2B2Q9Y2E5 1009 aa17.38■□□□□ 0.37
CHTOP-205ENST00000403433 TRBV5-3A0A0A0MS03 114 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 FAM220BPB1ANY3 271 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 CLOCKO15516 846 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 OR6B1O95007 311 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 MYF6P23409 242 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 PBLDP30039 288 aaPredicted RBP17.37■□□□□ 0.37
CHTOP-205ENST00000403433 RPS9P46781 194 aaKnown RBP17.37■□□□□ 0.37
CHTOP-205ENST00000403433 PGS1Q32NB8 556 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 GTDC1Q4AE62 458 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 FNDC3BQ53EP0 1204 aaKnown RBP17.37■□□□□ 0.37
CHTOP-205ENST00000403433 LRIF1Q5T3J3 769 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 ATG9BQ674R7 924 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 AGTRAPQ6RW13 159 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 GALNT15Q8N3T1 639 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 CYGBQ8WWM9 190 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 SMG7Q92540 1137 aaKnown RBP17.37■□□□□ 0.37
CHTOP-205ENST00000403433 FAM162AQ96A26 154 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 DTD2Q96FN9 168 aa17.37■□□□□ 0.37
CHTOP-205ENST00000403433 CPPED1Q9BRF8 314 aaPredicted RBP17.37■□□□□ 0.37
CHTOP-205ENST00000403433 TBCDQ9BTW9 1192 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms