RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 IRAK1BP1Q5VVH5 260 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 FRMPD2BQ6IN97 320 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CHERPQ8IWX8 916 aaKnown RBP11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 KBTBD2Q8IY47 623 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TBC1D21Q8IYX1 336 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 OR5K2Q8NHB8 316 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SLC35G2Q8TBE7 412 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 DLG3Q92796 817 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ULK4Q96C45 1275 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 QKIQ96PU8 341 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ENKD1Q9H0I2 346 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MCCC2Q9HCC0 563 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 RSPH14Q9UHP6 348 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ZNF835Q9Y2P0 537 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 HCFC1P51610 2035 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 LOC105369274A0A096LPK9 316 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 LOC102723532A0A0G2JNH3 316 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 A0A1W2PQ72 361 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 KRT87PA6NCN2 255 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 C2orf81A6NN90 581 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ADAM10O14672 748 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CLDN14O95500 239 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 GYPCP04921 128 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 H2AFZP0C0S5 128 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 RALBP11234 206 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TNNT1P13805 278 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ACPPP15309 386 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ITGALP20701 1170 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CAPN3P20807 821 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 AGAP20933 346 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ARHGAP25P42331 645 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 NR2C2P49116 596 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ARSFP54793 590 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 YBX1P67809 324 aaKnown RBP11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CSNK1G2P78368 415 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ZBED6P86452 979 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 FANCCQ00597 558 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 EEF1A2Q05639 463 aaKnown RBP11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SPARCL1Q14515 664 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 KIR2DS3Q14952 304 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 KAZNQ674X7 775 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 FIGLAQ6QHK4 219 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CLEC17AQ6ZS10 378 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 H2AFVQ71UI9 128 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TAX1BP1Q86VP1 789 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 VRK3Q8IV63 474 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 OR4N4Q8N0Y3 316 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 C10orf90Q96M02 699 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SPOCK3Q9BQ16 436 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TMUB1Q9BVT8 246 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 HES7Q9BYE0 225 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 GBA3Q9H227 469 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 C3orf18Q9UK00 162 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CAPN11Q9UMQ6 739 aa11.34□□□□□ -0.59
SPTLC1P3-201ENST00000403408 FN1P02751 2386 aaKnown RBP11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 COL6A5A8TX70 2615 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 IGLV3-12A0A075B6K2 115 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 DYTNA2CJ06 578 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 OR51F1A6NGY5 319 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CFAP99D6REC4 459 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 MAP2K7O14733 419 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 USP1O94782 785 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 RASAL1O95294 804 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 AP2A1O95782 977 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SERPINA7P05543 415 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 PSMB4P28070 264 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 RBL1P28749 1068 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 VSX2P58304 361 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 IQCB1Q15051 598 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 PCOLCEQ15113 449 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FILIP1LQ4L180 1135 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 LRRC38Q5VT99 294 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 HIBCHQ6NVY1 386 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 MTFR2Q6P444 385 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 Q6ZPB1 254 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NDUFAF7Q7L592 441 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NLRP9Q7RTR0 991 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FGD2Q7Z6J4 655 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CEP97Q8IW35 865 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 DNAJB8Q8NHS0 232 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 LKAAEAR1Q8TD35 194 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NRGNQ92686 78 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 BPIFA3Q9BQP9 254 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FSD1LQ9BXM9 530 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TSPAN10Q9H1Z9 355 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NXT1Q9UKK6 140 aaKnown RBP11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 MEMO1Q9Y316 297 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZANQ9Y493 2812 aa11.33□□□□□ -0.6
SPTLC1P3-201ENST00000403408 STAB1Q9NY15 2570 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 hCG_1818297A0A087WSY0 165 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 IGHV1-45A0A0A0MS14 117 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NSG1A0A0A6YYJ2 146 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 A0A1B0GTL3 188 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 H7C0S8 307 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 LIN7AO14910 233 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 PRAMEF2O60811 474 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 BMP10O95393 424 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TMEM253P0C7T8 217 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms