RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 PRPS2P11908 318 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 HALP42357 657 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 NEK2P51955 445 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 EEFSECP57772 596 aaKnown RBP11.91□□□□□ -0.5
CLIP4-203ENST00000401617 RPS14P62263 151 aaKnown RBP11.91□□□□□ -0.5
CLIP4-203ENST00000401617 IRF8Q02556 426 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 RPA4Q13156 261 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 HTR4Q13639 388 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 PTGR1Q14914 329 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 MAP7D1Q3KQU3 841 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 LPCAT4Q643R3 524 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 GRHL2Q6ISB3 625 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 LCN8Q6JVE9 175 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 SLC2A7Q6PXP3 512 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 IZUMO2Q6UXV1 221 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.91□□□□□ -0.5
CLIP4-203ENST00000401617 ARPINQ7Z6K5 226 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 DHFR2Q86XF0 187 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 TICAM1Q8IUC6 712 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 LILRA2Q8N149 483 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 GOLM1Q8NBJ4 401 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 SLCO4A1Q96BD0 722 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 HHIPQ96QV1 700 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 KLHL4Q9C0H6 718 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 GPRC5BQ9NZH0 403 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 ACTR3BQ9P1U1 418 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 NEUROG3Q9Y4Z2 214 aa11.91□□□□□ -0.5
CLIP4-203ENST00000401617 PCYT1BQ9Y5K3 369 aaPredicted RBP11.91□□□□□ -0.5
CLIP4-203ENST00000401617 AQP12BA6NM10 295 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 H0YIV9 168 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 PEX2P28328 305 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 SLC7A1P30825 629 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 HNF4AP41235 474 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 DGKQP52824 942 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 ATXN3P54252 364 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-203ENST00000401617 CLDN8P56748 225 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 CDK3Q00526 305 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 CSTF3Q12996 717 aaKnown RBP11.9□□□□□ -0.5
CLIP4-203ENST00000401617 PWP1Q13610 501 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 DOC2AQ14183 400 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 COL19A1Q14993 1142 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 ZNF776Q68DI1 518 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-203ENST00000401617 HEATR4Q86WZ0 1026 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 PDSS2Q86YH6 399 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 AQP12AQ8IXF9 295 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 LRRC56Q8IYG6 542 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-203ENST00000401617 FAM9CQ8IZT9 166 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 HDDC3Q8N4P3 179 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 OXR1Q8N573 874 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 TMEM102Q8N9M5 508 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-203ENST00000401617 OR2T3Q8NH03 318 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 ZNF480Q8WV37 535 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 NUDT8Q8WV74 236 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 ERLEC1Q96DZ1 483 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 WDR34Q96EX3 536 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 METTL2AQ96IZ6 378 aaKnown RBP11.9□□□□□ -0.5
CLIP4-203ENST00000401617 UHRF1Q96T88 793 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-203ENST00000401617 ZBTB18Q99592 522 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 GABRG3Q99928 467 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 SGPP1Q9BX95 441 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 TEX101Q9BY14 249 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 DPY30Q9C005 99 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 ZDHHC5Q9C0B5 715 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 OR52A5Q9H2C5 316 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 SERGEFQ9UGK8 458 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 DLGAP4Q9Y2H0 992 aa11.9□□□□□ -0.5
CLIP4-203ENST00000401617 DNMT3AQ9Y6K1 912 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-203ENST00000401617 E7EQ34 232 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 RNASEH2AO75792 299 aaKnown RBP11.89□□□□□ -0.51
CLIP4-203ENST00000401617 IL6P05231 212 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 C7P10643 843 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 AMD1P17707 334 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 ATP6V1B2P21281 511 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 BMP8BP34820 402 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 TRIM23P36406 574 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 GSK3BP49841 420 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 GTF2A1P52655 376 aaPredicted RBP11.89□□□□□ -0.51
CLIP4-203ENST00000401617 NFE2L1Q14494 772 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 TRIP10Q15642 601 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 SFT2D3Q587I9 215 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 RABL3Q5HYI8 236 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 UNC5DQ6UXZ4 953 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 FAM83HQ6ZRV2 1179 aaPredicted RBP11.89□□□□□ -0.51
CLIP4-203ENST00000401617 OR9A1PQ8NGU1 263 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 OR2T34Q8NGX1 318 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 DNAJB14Q8TBM8 379 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 GTF2H4Q92759 462 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 C11orf24Q96F05 449 aaPredicted RBP11.89□□□□□ -0.51
CLIP4-203ENST00000401617 CGREF1Q99674 301 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 SPATA6Q9NWH7 488 aaPredicted RBP11.89□□□□□ -0.51
CLIP4-203ENST00000401617 ZFR2Q9UPR6 939 aaKnown RBP11.89□□□□□ -0.51
CLIP4-203ENST00000401617 TMEM98Q9Y2Y6 226 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 AP4S1Q9Y587 144 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 HSD3B1P14060 373 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 HSD3B2P26439 372 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 NTSR1P30989 418 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 TIE1P35590 1138 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 FGL2Q14314 439 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 XKR6Q5GH73 641 aa11.89□□□□□ -0.51
CLIP4-203ENST00000401617 HABP4Q5JVS0 413 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms