RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 LATO43561 262 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 SEMA4FO95754 770 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 HNRNPA2B1P22626 353 aaKnown RBP24.85■■□□□ 1.57
CPNE1-205ENST00000401607 RPL10P27635 214 aaKnown RBP24.85■■□□□ 1.57
CPNE1-205ENST00000401607 CLCNKAP51800 687 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 TBL3Q12788 808 aaKnown RBP24.85■■□□□ 1.57
CPNE1-205ENST00000401607 CAPRIN2Q6IMN6 1127 aaKnown RBP24.85■■□□□ 1.57
CPNE1-205ENST00000401607 PGM2L1Q6PCE3 622 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 WDR60Q8WVS4 1066 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 SELENOMQ8WWX9 145 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 RAD51AP1Q96B01 352 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 TEX37Q96LM6 180 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 ACPTQ9BZG2 426 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 ELOVL6Q9H5J4 265 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 MOSPD1Q9UJG1 213 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 KCNK6Q9Y257 313 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 WDR37Q9Y2I8 494 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 CFAP20Q9Y6A4 193 aaKnown RBP24.85■■□□□ 1.57
CPNE1-205ENST00000401607 KANSL1LA0AUZ9 987 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 C9JVG2 144 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 E7ENX8 843 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 FPGTO14772 594 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 SLC35G4P0C7Q5 338 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 ZFP36L2P47974 494 aaKnown RBP24.85■■□□□ 1.57
CPNE1-205ENST00000401607 PNLIPRP1P54315 467 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 TAP2Q03519 686 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 FZD5Q13467 585 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 DOC2AQ14183 400 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 XKR6Q5GH73 641 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 CAPN13Q6MZZ7 669 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-205ENST00000401607 PGAM4Q8N0Y7 254 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 SYNPOQ8N3V7 929 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 OR5K2Q8NHB8 316 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 MRPL1Q9BYD6 325 aaKnown RBP24.85■■□□□ 1.57
CPNE1-205ENST00000401607 EBF2Q9HAK2 575 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 PLAGL1Q9UM63 463 aa24.85■■□□□ 1.57
CPNE1-205ENST00000401607 KRBA1A5PL33 1030 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 IFRD1O00458 451 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-205ENST00000401607 NR5A2O00482 541 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 NRP2O60462 931 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 KELP23276 732 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 NEK2P51955 445 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 ART3Q13508 389 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 LRP8Q14114 963 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 KPNB1Q14974 876 aaKnown RBP24.84■■□□□ 1.57
CPNE1-205ENST00000401607 IMPG1Q17R60 797 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 SMU1Q2TAY7 513 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 TPRG1LQ5T0D9 272 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 IL17FQ96PD4 163 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 SLC52A3Q9NQ40 469 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 GPRC5BQ9NZH0 403 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 GPSM3Q9Y4H4 160 aa24.84■■□□□ 1.57
CPNE1-205ENST00000401607 POLR3HQ9Y535 204 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-205ENST00000401607 CAPN3P20807 821 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 HNRNPH1P31943 449 aaKnown RBP24.83■■□□□ 1.57
CPNE1-205ENST00000401607 GNPDA1P46926 289 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 UFM1P61960 85 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 RPL38P63173 70 aaKnown RBP24.83■■□□□ 1.57
CPNE1-205ENST00000401607 E2F2Q14209 437 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 LRRC32Q14392 662 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 NFATC4Q14934 902 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 PUS10Q3MIT2 529 aaKnown RBP24.83■■□□□ 1.57
CPNE1-205ENST00000401607 IL23RQ5VWK5 629 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 FRG2Q64ET8 278 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 GRHL2Q6ISB3 625 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 ANO7Q6IWH7 933 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 DUS1LQ6P1R4 473 aaKnown RBP24.83■■□□□ 1.57
CPNE1-205ENST00000401607 GCNT7Q6ZNI0 430 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 FRG2BQ96QU4 278 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 OSGEPL1Q9H4B0 414 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 WDR41Q9HAD4 459 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 NOP53Q9NZM5 478 aaKnown RBP24.83■■□□□ 1.57
CPNE1-205ENST00000401607 ZIM2Q9NZV7 527 aa24.83■■□□□ 1.57
CPNE1-205ENST00000401607 PRSS38A1L453 326 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 SERTM1A2A2V5 107 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 CLGNO14967 610 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 KCNJ13O60928 360 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 ENTPD5O75356 428 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 PDE5AO76074 875 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 G6PDP11413 515 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 SLC2A4P14672 509 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 NPPBP16860 134 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 DPP6P42658 865 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 MMEL1Q495T6 779 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 BLOC1S3Q6QNY0 202 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 EFCAB3Q8N7B9 438 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 NEIL2Q969S2 332 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 C6orf106Q9H6K1 298 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-205ENST00000401607 LRTM1Q9HBL6 345 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 LTB4R2Q9NPC1 389 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 NDE1Q9NXR1 346 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 CYP8B1Q9UNU6 501 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 SH2B3Q9UQQ2 575 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 TDRKHQ9Y2W6 561 aaKnown RBP24.82■■□□□ 1.56
CPNE1-205ENST00000401607 KCNE2Q9Y6J6 123 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 MRASO14807 208 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 SORBS2O94875 1100 aaKnown RBP24.82■■□□□ 1.56
CPNE1-205ENST00000401607 RPN2P04844 631 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 ERGP11308 486 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 GNAZP19086 355 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms