RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 OVOS1Q6IE37 1185 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 KRTCAP2Q8N6L1 136 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 GLB1L3Q8NCI6 653 aaPredicted RBP16.67■□□□□ 0.26
PTPRA-205ENST00000399903 ST6GAL2Q96JF0 529 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 KCNC2Q96PR1 638 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 RAPGEFL1Q9UHV5 662 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 ABCG2Q9UNQ0 655 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 HHLA1C9JL84 531 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 CD3EAPO15446 510 aaKnown RBP16.67■□□□□ 0.26
PTPRA-205ENST00000399903 HOXC8P31273 242 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 GRK4P32298 578 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 RYKP34925 604 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 CA5AP35218 305 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 DAPP51397 102 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 ZNF45Q02386 682 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 GALNT3Q14435 633 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 SLX4IPQ5VYV7 408 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 CCDC28AQ8IWP9 274 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 UBQLNLQ8IYU4 475 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 TTC9BQ8N6N2 239 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 HCAR2Q8TDS4 363 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 SMARCD1Q96GM5 515 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 SLC2A13Q96QE2 648 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 ZNF225Q9UK10 706 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 ARIH1Q9Y4X5 557 aaPredicted RBP16.67■□□□□ 0.26
PTPRA-205ENST00000399903 MIA3Q5JRA6 1907 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 SLC10A3P09131 477 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 UROSP10746 265 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 AKT1P31749 480 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 OR1G1P47890 313 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 HMGCS1Q01581 520 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 SEMA3BQ13214 749 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 MED22Q15528 200 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 SLC13A3Q8WWT9 602 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 DNASE1L2Q92874 299 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 UXTQ9UBK9 157 aaPredicted RBP16.67■□□□□ 0.26
PTPRA-205ENST00000399903 SMIM30A4D0T7 59 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 OR2A25A4D2G3 310 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 FAM25AB3EWG3 89 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 FAM25CB3EWG5 89 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 FAM25GB3EWG6 89 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 MAFKO60675 156 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 GUCA1CO95843 209 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 B3GALT4O96024 378 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 FHP07954 510 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 WEE1P30291 646 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 GATMP50440 423 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 DGKEP52429 567 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 UBE3AQ05086 875 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 SLC39A12Q504Y0 691 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 BHLHA9Q7RTU4 235 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 STX19Q8N4C7 294 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 UTP15Q8TED0 518 aaKnown RBP16.66■□□□□ 0.26
PTPRA-205ENST00000399903 NT5C3BQ969T7 300 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 CCDC120Q96HB5 630 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 ZNF599Q96NL3 588 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 ATOH8Q96SQ7 321 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 GPR21Q99679 349 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 RABL2BQ9UNT1 228 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 LOC105371267A0A1B0GV96 52 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 SEPT4O43236 478 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 ADAMTS4O75173 837 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 CHRM5P08912 532 aaPredicted RBP16.66■□□□□ 0.26
PTPRA-205ENST00000399903 CBLP22681 906 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 UQCRC1P31930 480 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 SOX6P35712 828 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 SEMA3AQ14563 771 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 Q6ZSR9 355 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 SPERTQ8NA61 448 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 RHBDF1Q96CC6 855 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 VPS35Q96QK1 796 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 NAALAD2Q9Y3Q0 740 aa16.66■□□□□ 0.26
PTPRA-205ENST00000399903 MEIOCA2RUB1 952 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 NT5C1B-RDH14C9J2C7 533 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 AREL1O15033 823 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 MATN3O15232 486 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 TBX18O95935 607 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 RPLP0P05388 317 aaKnown RBP16.65■□□□□ 0.26
PTPRA-205ENST00000399903 HMBSP08397 361 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 ODC1P11926 461 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 CCNCP24863 283 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 IL12RB1P42701 662 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 PPP3CCP48454 512 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 TUBA1BP68363 451 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 MAD2L1BPQ15013 274 aaPredicted RBP16.65■□□□□ 0.26
PTPRA-205ENST00000399903 CD300LGQ6UXG3 332 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 PAMR1Q6UXH9 720 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 TUBA1AQ71U36 451 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 ZNF548Q8NEK5 533 aaPredicted RBP16.65■□□□□ 0.26
PTPRA-205ENST00000399903 OR56A4Q8NGH8 313 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 KCTD13Q8WZ19 329 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 TPD52L3Q96J77 140 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 DPY30Q9C005 99 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 ZIM2Q9NZV7 527 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 PNMA8CA0A1B0GUJ8 204 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 PER2O15055 1255 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 STSP08842 583 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 PCSK1P29120 753 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 SCNN1AP37088 669 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 FAM189BP81408 668 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms