RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 PCBP2Q15366 365 aaKnown RBP eCLIP11.81□□□□□ -0.52
CACNA1C-213ENST00000399629 CLEC6AQ6EIG7 209 aa11.81□□□□□ -0.52
CACNA1C-213ENST00000399629 ANKRD46Q86W74 232 aa11.81□□□□□ -0.52
CACNA1C-213ENST00000399629 SMPDL3AQ92484 453 aa11.81□□□□□ -0.52
CACNA1C-213ENST00000399629 MAP3K3Q99759 626 aa11.81□□□□□ -0.52
CACNA1C-213ENST00000399629 CNTN3Q9P232 1028 aa11.81□□□□□ -0.52
CACNA1C-213ENST00000399629 PIAS3Q9Y6X2 628 aa11.81□□□□□ -0.52
CACNA1C-213ENST00000399629 CAMTA1Q9Y6Y1 1673 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 ZNF3P17036 446 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 BST1Q10588 318 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 FAM214AQ32MH5 1076 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 CLEC20AQ6ZU45 233 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 LIX1LQ8IVB5 337 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 FBXW8Q8N3Y1 598 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 CLEC4CQ8WTT0 213 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 CPNE2Q96FN4 548 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 WDR92Q96MX6 357 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 SLC39A3Q9BRY0 314 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 RAPGEFL1Q9UHV5 662 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 GRIP1Q9Y3R0 1128 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 PCDHGB1Q9Y5G3 927 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 A0A1W2PPL8 197 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 PIAS1O75925 651 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 BPNT1O95861 308 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 GALTP07902 379 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 MSX1P28360 303 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 CCNHP51946 323 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 HTRA3P83110 453 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 IL18Q14116 193 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 ZNF792Q3KQV3 632 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 GLYATQ6IB77 296 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 GPALPP1Q8IXQ4 340 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 MEIOBQ8N635 442 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 OR2M4Q96R27 311 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 DEFB126Q9BYW3 111 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 TTC24A2A3L6 582 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 PDCD5O14737 125 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 TNFRSF21O75509 655 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 FARS2O95363 451 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 KLK1P06870 262 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 ARL3P36405 182 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 LCP2Q13094 533 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 NYAP1Q6ZVC0 841 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 GPR65Q8IYL9 337 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 ZNF461Q8TAF7 563 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 FRS2Q8WU20 508 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 NINJ1Q92982 152 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 C8orf48Q96LL4 319 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 CEP295NLQ96MC4 621 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 AGAP2Q99490 1192 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 ACTL8Q9H568 366 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 APOBEC3BQ9UH17 382 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 RARRES3Q9UL19 164 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 ERN2Q76MJ5 926 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 MON1BQ7L1V2 547 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 LRRC17Q8N6Y2 441 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 TXNDC5Q8NBS9 432 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 TFGQ92734 400 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 PRTFDC1Q9NRG1 225 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 GRXCR1A8MXD5 290 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 NRP2O60462 931 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 ATP6V1G2O95670 118 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 SERPINA6P08185 405 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 IGFBP5P24593 272 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 SHMT2P34897 504 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 GRIA2P42262 883 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 C1orf61Q13536 156 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 PITRM1Q5JRX3 1037 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 LYSMD3Q7Z3D4 306 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 KBTBD6Q86V97 674 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 GTPBP3Q969Y2 492 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 MFSD3Q96ES6 412 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 GAL3ST1Q99999 423 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 ORAI3Q9BRQ5 295 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 KCNK13Q9HB14 408 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 C1orf109Q9NX04 203 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 THUMPD1Q9NXG2 353 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 ATXN10Q9UBB4 475 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 P2RX2Q9UBL9 471 aa11.8□□□□□ -0.52
CACNA1C-213ENST00000399629 FAM237AA0A1B0GTK4 181 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 K7EPI3 171 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 OR1I1O60431 355 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 FADS2O95864 444 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 TIMP1P01033 207 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 SHBGP04278 402 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 DNAJA1P31689 397 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 NR0B2Q15466 257 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 FAM131AQ6UXB0 335 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 LRRC55Q6ZSA7 311 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 ARMC10Q8N2F6 343 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 SMARCD2Q92925 531 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 OTUB2Q96DC9 234 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 PWWP2AQ96N64 755 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 CCNL2Q96S94 520 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 NPLQ9BXD5 320 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 OR8D2Q9GZM6 311 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 LMAN1LQ9HAT1 526 aa11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 ZFR2Q9UPR6 939 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-213ENST00000399629 C2P06681 752 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 240.8 ms