RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 KRT74Q7RTS7 529 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 DHDDSQ86SQ9 333 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 CENPSQ8N2Z9 138 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 OR5M3Q8NGP4 307 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 ASB15Q8WXK1 588 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 RORBQ92753 470 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 TSSK3Q96PN8 268 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 SMOQ99835 787 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 UBE2ZQ9H832 354 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 UTS2RQ9UKP6 389 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 SAMHD1Q9Y3Z3 626 aaKnown RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 PCDHGB7Q9Y5F8 929 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 HDAC3O15379 428 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 PRODHO43272 600 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 KIF1CO43896 1103 aaKnown RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 RSL1D1O76021 490 aaKnown RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 PIK3CBP42338 1070 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 INCA1Q0VD86 236 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 MYBPC3Q14896 1274 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 TAF5Q15542 800 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 DUOXA1Q1HG43 343 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 CLLU1OSQ5K130 101 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 DCST1Q5T197 706 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 HSDL2Q6YN16 418 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 ZNF100Q8IYN0 542 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 EDAQ92838 391 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 BTBD10Q9BSF8 475 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 TLR10Q9BXR5 811 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 FLRT1Q9NZU1 646 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 P2RX2Q9UBL9 471 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 CFAP20Q9Y6A4 193 aaKnown RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 TCRBV9S1A1TA0A576 114 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 SLC16A5O15375 505 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 PEX14O75381 377 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 FARS2O95363 451 aaKnown RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 HNRNPLP14866 589 aaKnown RBP eCLIP7.76□□□□□ -1.174e-6■□□□□ 11
USP47-203ENST00000399455 ACVR2AP27037 513 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 ADSSP30520 456 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 C10orf62Q5T681 223 aaPredicted RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 DCAF12Q5T6F0 453 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 SYVN1Q86TM6 617 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 FUKQ8N0W3 1084 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 SETD6Q8TBK2 473 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 DNAJB14Q8TBM8 379 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 CAMK1GQ96NX5 476 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 CDRT15Q96T59 188 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 BCAS3Q9H6U6 928 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 LRRC4CQ9HCJ2 640 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 TRIM43BA6NCK2 446 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 SOBPA7XYQ1 873 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 NPIPA2E9PIF3 369 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 NPIPA3F8WFD2 350 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 BCAT2O15382 392 aaPredicted RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 CST1P01037 141 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 IFNW1P05000 195 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 HOXC13P31276 330 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 TGFBR2P37173 567 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 DRG2P55039 364 aaKnown RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 MLLT6P55198 1093 aaPredicted RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 NOXRED1Q6NXP6 359 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 PTCHD4Q6ZW05 846 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 IKBIPQ70UQ0 350 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 GLB1L3Q8NCI6 653 aaPredicted RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 PDPRQ8NCN5 879 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 C1orf109Q9NX04 203 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 PPP4R1LQ9P1A2 415 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 GMPPBQ9Y5P6 360 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 ALOX15BO15296 676 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 CCR10P46092 362 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 LIMK2P53671 638 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 CLRN1P58418 232 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 SEMG2Q02383 582 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 GRM7Q14831 915 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 TMEM198Q66K66 360 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 KCT2Q8NC54 265 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 C11orf65Q8NCR3 313 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 CLHC1Q8NHS4 586 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 NANOS1Q8WY41 292 aaKnown RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 SLC25A36Q96CQ1 311 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 TOE1Q96GM8 510 aaKnown RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 PHF7Q9BWX1 381 aaPredicted RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 EIF3KQ9UBQ5 218 aaKnown RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 C2orf78A6NCI8 922 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 C2orf71A6NGG8 1288 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 MAGEB17A8MXT2 336 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 PPEF2O14830 753 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 CNTN5O94779 1100 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 RFX4Q33E94 735 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 ARL9Q6T311 187 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 KIF2BQ8N4N8 673 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 TRPV1Q8NER1 839 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 RFKQ969G6 155 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 AGAP2Q99490 1192 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 KIFC1Q9BW19 673 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 PIGUQ9H490 435 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 SAR1AQ9NR31 198 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 SLC39A1Q9NY26 324 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 MAU2Q9Y6X3 613 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 SOX30O94993 753 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 FABP3P05413 133 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms