RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 AP1S2P56377 157 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 C16orf72Q14CZ0 275 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ACAP2Q15057 778 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ISXQ2M1V0 245 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KRT71Q3SY84 523 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 IRGCQ6NXR0 463 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 AGTRAPQ6RW13 159 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SUSD1Q6UWL2 747 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 DGLUCYQ7Z3D6 616 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PRSS42Q7Z5A4 293 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ARHGAP22Q7Z5H3 698 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CACTIN-AS1Q8N1I8 211 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 RCBTB1Q8NDN9 531 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 OR2A1Q8NGT9 310 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 RHEBL1Q8TAI7 183 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 MCOLN3Q8TDD5 553 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 RHBDF1Q96CC6 855 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 FBXL8Q96CD0 374 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CCDC138Q96M89 665 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TMEM79Q9BSE2 394 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 RAB11FIP5Q9BXF6 653 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ATG10Q9H0Y0 220 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ARL15Q9NXU5 204 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TMEM216Q9P0N5 145 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KLHL3Q9UH77 587 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 EMCNQ9ULC0 261 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CLCA2Q9UQC9 943 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ASB1Q9Y576 335 aa11.99□□□□□ -0.49
HLA-DQB1-203ENST00000399082 UQCRHLA0A096LP55 91 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 C2orf74A8MZ97 194 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 UBXN8O00124 270 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TAPBPO15533 448 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ZW10O43264 779 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PRAMEF10O60809 474 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 UQCRHP07919 91 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ANKRD34CP0C6C1 535 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PVRP15151 417 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ST6GAL1P15907 406 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KRT15P19012 456 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SLC6A12P48065 614 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 INHBCP55103 352 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TBPL1P62380 186 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SLC18A2Q05940 514 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 FOXC1Q12948 553 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TARDBPQ13148 414 aaKnown RBP eCLIP11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KIR2DS3Q14952 304 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ZIC1Q15915 447 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 FAM83EQ2M2I3 478 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 FBXO48Q5FWF7 155 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SNAP47Q5SQN1 464 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CEP85LQ5SZL2 805 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 C16orf46Q6P387 395 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KLHL35Q6PF15 583 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SPESP1Q6UW49 350 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TMPRSS12Q86WS5 348 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 GPSM1Q86YR5 675 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PLXDC1Q8IUK5 500 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KLHDC8AQ8IYD2 350 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 C4orf33Q8N1A6 199 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PDPRQ8NCN5 879 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 OR56A3Q8NH54 315 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 STAG3L4Q8TBR4 150 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SMPDL3AQ92484 453 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CABS1Q96KC9 395 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 OR4K3Q96R72 315 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 DPYSL5Q9BPU6 564 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SGPP1Q9BX95 441 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 C12orf65Q9H3J6 166 aaKnown RBP11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 XPR1Q9UBH6 696 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KLK13Q9UKR3 277 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 RNF112Q9ULX5 631 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SH2B3Q9UQQ2 575 aa11.98□□□□□ -0.49
HLA-DQB1-203ENST00000399082 IGKV1-8A0A0C4DH67 115 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TLCD2A6NGC4 264 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 NCF1BA6NI72 391 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 A8MU76 341 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 NCF1CA8MVU1 366 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ISM1B1AKI9 464 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TK2O00142 265 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 MATN2O00339 956 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KLK8O60259 260 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KDM1AO60341 852 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 NRP2O60462 931 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SASH3O75995 380 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 HIST1H2AGP0C0S8 130 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 NCF1P14598 390 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KRT4P19013 534 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SPINK2P20155 84 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 HIST1H2ADP20671 130 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 OAS2P29728 719 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CAMK2BQ13554 666 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 NAE1Q13564 534 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SLC5A12Q1EHB4 618 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TSNAXIP1Q2TAA8 658 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PHF19Q5T6S3 580 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 FRA10AC1Q70Z53 315 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SRRM1Q8IYB3 904 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SYTL1Q8IYJ3 562 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CNPY4Q8N129 248 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KLHL6Q8WZ60 621 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms