RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SLC47A1Q96FL8 570 aa2.54□□□□□ -2
CD47-203ENST00000398258 MYADMQ96S97 322 aa2.54□□□□□ -2
CD47-203ENST00000398258 INTS14Q96SY0 518 aa2.54□□□□□ -2
CD47-203ENST00000398258 RAD9AQ99638 391 aa2.54□□□□□ -2
CD47-203ENST00000398258 KATNB1Q9BVA0 655 aa2.54□□□□□ -2
CD47-203ENST00000398258 FN3KQ9H479 309 aa2.54□□□□□ -2
CD47-203ENST00000398258 PELI2Q9HAT8 420 aa2.54□□□□□ -2
CD47-203ENST00000398258 GRPEL1Q9HAV7 217 aa2.54□□□□□ -2
CD47-203ENST00000398258 OLFML3Q9NRN5 406 aa2.54□□□□□ -2
CD47-203ENST00000398258 GKN1Q9NS71 199 aa2.54□□□□□ -2
CD47-203ENST00000398258 ERAP1Q9NZ08 941 aa2.54□□□□□ -2
CD47-203ENST00000398258 TBC1D7Q9P0N9 293 aa2.54□□□□□ -2
CD47-203ENST00000398258 ZDHHC2Q9UIJ5 367 aa2.54□□□□□ -2
CD47-203ENST00000398258 KCNG2Q9UJ96 466 aa2.54□□□□□ -2
CD47-203ENST00000398258 RNF150Q9ULK6 438 aa2.54□□□□□ -2
CD47-203ENST00000398258 POMT1Q9Y6A1 747 aa2.54□□□□□ -2
CD47-203ENST00000398258 WDR81Q562E7 1941 aa2.54□□□□□ -2
CD47-203ENST00000398258 ARHGEF37A1IGU5 675 aa2.53□□□□□ -2
CD47-203ENST00000398258 OOEPA6NGQ2 149 aa2.53□□□□□ -2
CD47-203ENST00000398258 PLOD2O00469 737 aa2.53□□□□□ -2
CD47-203ENST00000398258 KRT36O76013 467 aa2.53□□□□□ -2
CD47-203ENST00000398258 PIGNO95427 931 aa2.53□□□□□ -2
CD47-203ENST00000398258 TGDSO95455 350 aa2.53□□□□□ -2
CD47-203ENST00000398258 KRT19P08727 400 aa2.53□□□□□ -2
CD47-203ENST00000398258 SUPT20HL2P0C7V6 817 aa2.53□□□□□ -2
CD47-203ENST00000398258 SMIM18P0DKX4 95 aa2.53□□□□□ -2
CD47-203ENST00000398258 HSPA8P11142 646 aaKnown RBP2.53□□□□□ -2
CD47-203ENST00000398258 MSH3P20585 1137 aa2.53□□□□□ -2
CD47-203ENST00000398258 EFNA1P20827 205 aaPredicted RBP2.53□□□□□ -2
CD47-203ENST00000398258 ACAT1P24752 427 aaKnown RBP2.53□□□□□ -2
CD47-203ENST00000398258 DCTP40126 519 aa2.53□□□□□ -2
CD47-203ENST00000398258 TNNT3P45378 269 aaPredicted RBP2.53□□□□□ -2
CD47-203ENST00000398258 CDX1P47902 265 aaPredicted RBP2.53□□□□□ -2
CD47-203ENST00000398258 RGS7P49802 495 aa2.53□□□□□ -2
CD47-203ENST00000398258 TAF6P49848 677 aa2.53□□□□□ -2
CD47-203ENST00000398258 MFAP3P55082 362 aa2.53□□□□□ -2
CD47-203ENST00000398258 DLX5P56178 289 aa2.53□□□□□ -2
CD47-203ENST00000398258 B3GALT5-AS1P59052 145 aa2.53□□□□□ -2
CD47-203ENST00000398258 PTENP60484 403 aa2.53□□□□□ -2
CD47-203ENST00000398258 RPS18P62269 152 aaKnown RBP2.53□□□□□ -2
CD47-203ENST00000398258 POU3F1Q03052 451 aaPredicted RBP2.53□□□□□ -2
CD47-203ENST00000398258 TNK1Q13470 666 aa2.53□□□□□ -2
CD47-203ENST00000398258 E2F5Q15329 346 aa2.53□□□□□ -2
CD47-203ENST00000398258 ASPRV1Q53RT3 343 aa2.53□□□□□ -2
CD47-203ENST00000398258 ELFN2Q5R3F8 820 aa2.53□□□□□ -2
CD47-203ENST00000398258 IRAK1BP1Q5VVH5 260 aa2.53□□□□□ -2
CD47-203ENST00000398258 TXNRD3NBQ6F5E7 133 aa2.53□□□□□ -2
CD47-203ENST00000398258 C11orf63Q6NUN7 778 aa2.53□□□□□ -2
CD47-203ENST00000398258 ENPP7Q6UWV6 458 aa2.53□□□□□ -2
CD47-203ENST00000398258 NHLRC1Q6VVB1 395 aa2.53□□□□□ -2
CD47-203ENST00000398258 ANKRD33Q7Z3H0 272 aa2.53□□□□□ -2
CD47-203ENST00000398258 PIWIL3Q7Z3Z3 882 aaKnown RBP2.53□□□□□ -2
CD47-203ENST00000398258 ZNF554Q86TJ5 538 aa2.53□□□□□ -2
CD47-203ENST00000398258 SLC9B2Q86UD5 537 aa2.53□□□□□ -2
CD47-203ENST00000398258 FAM9BQ8IZU0 186 aa2.53□□□□□ -2
CD47-203ENST00000398258 SIX6OS1Q8N1H7 587 aa2.53□□□□□ -2
CD47-203ENST00000398258 SPEM1Q8N4L4 309 aa2.53□□□□□ -2
CD47-203ENST00000398258 METTL27Q8N6F8 245 aaPredicted RBP2.53□□□□□ -2
CD47-203ENST00000398258 MAPKAPK5-AS1Q8N8E1 139 aa2.53□□□□□ -2
CD47-203ENST00000398258 THAP8Q8NA92 274 aa2.53□□□□□ -2
CD47-203ENST00000398258 KLHDC9Q8NEP7 349 aa2.53□□□□□ -2
CD47-203ENST00000398258 DNASE1L2Q92874 299 aa2.53□□□□□ -2
CD47-203ENST00000398258 ATP6V1E2Q96A05 226 aa2.53□□□□□ -2
CD47-203ENST00000398258 RTP3Q9BQQ7 232 aa2.53□□□□□ -2
CD47-203ENST00000398258 GPATCH1Q9BRR8 931 aaKnown RBP2.53□□□□□ -2
CD47-203ENST00000398258 DESI2Q9BSY9 194 aa2.53□□□□□ -2
CD47-203ENST00000398258 LAT2Q9GZY6 243 aa2.53□□□□□ -2
CD47-203ENST00000398258 RSPH9Q9H1X1 276 aaPredicted RBP2.53□□□□□ -2
CD47-203ENST00000398258 COPS7BQ9H9Q2 264 aaPredicted RBP2.53□□□□□ -2
CD47-203ENST00000398258 TRPV4Q9HBA0 871 aa2.53□□□□□ -2
CD47-203ENST00000398258 SDR39U1Q9NRG7 319 aaPredicted RBP2.53□□□□□ -2
CD47-203ENST00000398258 SLC38A7Q9NVC3 462 aa2.53□□□□□ -2
CD47-203ENST00000398258 DDX43Q9NXZ2 648 aaKnown RBP2.53□□□□□ -2
CD47-203ENST00000398258 COQ3Q9NZJ6 369 aa2.53□□□□□ -2
CD47-203ENST00000398258 IGSF1Q8N6C5 1336 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 DUXAA6NLW8 204 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 C2CD4DB7Z1M9 353 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 FAM86B1E9PN63 330 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 CAPN9O14815 690 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 SLC22A2O15244 555 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 FMO6PO60774 539 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 PRKRAO75569 313 aaKnown RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 SLU7O95391 586 aaKnown RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 ACSL3O95573 720 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 VIMP08670 466 aaKnown RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 F7P08709 466 aaPredicted RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 FAM86B2P0C5J1 330 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 IGHV4-38-2P0DP08 117 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 EEF2P13639 858 aaKnown RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 IRF2P14316 349 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 LIFP15018 202 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 AMD1P17707 334 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 CA4P22748 312 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 MARK3P27448 753 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 HSD17B3P37058 310 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 WNT5AP41221 380 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 CRKLP46109 303 aaKnown RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 LGALS3BPQ08380 585 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 ARL16Q0P5N6 197 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 PTK6Q13882 451 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms