RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 MYADML2A6NDP7 307 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 GADD45GO95257 159 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 HAPLN1P10915 354 aaPredicted RBP11.11□□□□□ -0.63
TTC28-201ENST00000397906 ARHGDIBP52566 201 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 C1QTNF1Q9BXJ1 281 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 STRADBQ9C0K7 418 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 NMUR2Q9GZQ4 415 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 TFECO14948 347 aaPredicted RBP11.11□□□□□ -0.63
TTC28-201ENST00000397906 BCHEP06276 602 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 NDUFS1P28331 727 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 CD47Q08722 323 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 CARTPTQ16568 116 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 NOXRED1Q6NXP6 359 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 SERINC1Q9NRX5 453 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 A0A1W2PRB8 838 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 GLOD5A6NK44 160 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 H0YGN5 161 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 CCNB2O95067 398 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 QPRTQ15274 297 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 NFAT5O94916 1531 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 HAS3O00219 553 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 EDF1O60869 148 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 F2P00734 622 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 ATP5A1P25705 553 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 RPS14P62263 151 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 FUKQ8N0W3 1084 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 NUSAP1Q9BXS6 441 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 AJAP1Q9UKB5 411 aaPredicted RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 GPR34Q9UPC5 381 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 A0A1W2PP55 124 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 EIF1AYO14602 144 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 CPNE3O75131 537 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 HSD11B1P28845 292 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 VSX2P58304 361 aaPredicted RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 TAS2R39P59534 338 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 MXD1Q05195 221 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 AHSA2Q719I0 299 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 TBC1D21Q8IYX1 336 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 TFGQ92734 400 aaPredicted RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 IL23AQ9NPF7 189 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 LEFTY1O75610 366 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 GRIA1P42261 906 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 KLF10Q13118 480 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 ULK3Q6PHR2 472 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 IFT46Q9NQC8 304 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 K7EPI3 171 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 CLEC3AO75596 197 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 SCGNO76038 276 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 RENP00797 406 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 C1orf61Q13536 156 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 SCARB2Q14108 478 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 THAP5Q7Z6K1 395 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 PROKR2Q8NFJ6 384 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 MKKSQ9NPJ1 570 aaPredicted RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 FHP07954 510 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 PIM1P11309 404 aaPredicted RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 OGNP20774 298 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 LRP10Q7Z4F1 713 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 CDH24Q86UP0 819 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 POC5Q8NA72 575 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 PHOSPHO1Q8TCT1 267 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 RASSF5Q8WWW0 418 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 RNPEPL1Q9HAU8 725 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 KCTD3Q9Y597 815 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 C2orf78A6NCI8 922 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 THOC6Q86W42 341 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 CORO1CQ9ULV4 474 aaPredicted RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 AP4B1Q9Y6B7 739 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 KCPQ6ZWJ8 1503 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 SIX3O95343 332 aaPredicted RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 HNRNPH3P31942 346 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 TXNL4AP83876 142 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 ELOCQ15369 112 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 SMYD5Q6GMV2 418 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 FAM47BQ8NA70 645 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 OR2L3Q8NG85 312 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 RBM4BQ9BQ04 359 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 RBM4Q9BWF3 364 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 FAM124BQ9H5Z6 455 aaPredicted RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 PCDHGA3Q9Y5H0 932 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 SIGLEC1Q9BZZ2 1709 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 PAK4O96013 591 aaPredicted RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 GDF5P43026 501 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 LRP8Q14114 963 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 C6orf52Q5T4I8 152 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 OSBPL11Q9BXB4 747 aa11.1□□□□□ -0.63
TTC28-201ENST00000397906 ELAC1Q9H777 363 aaKnown RBP11.1□□□□□ -0.63
TTC28-201ENST00000397906 GSC2O15499 205 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 TBX1O43435 398 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 GJB5O95377 273 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 SLC39A5Q6ZMH5 540 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 GJD3Q8N144 294 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 OR2T34Q8NGX1 318 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 OR2T3Q8NH03 318 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 RIT1Q92963 219 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 TGM7Q96PF1 710 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 SLC35A5Q9BS91 424 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 SMOC2Q9H3U7 446 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 PIGUQ9H490 435 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 ANXA2P2A6NMY6 339 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms