RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 ADAMTS15Q8TE58 950 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 TMIGD2Q96BF3 282 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 ISOC1Q96CN7 298 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 SPACA7Q96KW9 195 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 PKP4Q99569 1192 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 CERS4Q9HA82 394 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 MARCH4Q9P2E8 410 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-204ENST00000397545 SAGE2PA6NJ88 616 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 AURKAO14965 403 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 NDUFB5O43674 189 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 OR10H2O60403 315 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 HAPLN1P10915 354 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-204ENST00000397545 SYN1P17600 705 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 GUCA1AP43080 201 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-204ENST00000397545 IST1P53990 364 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 RHAGQ02094 409 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 SCN1BQ07699 218 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 RAPSNQ13702 412 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 C5orf22Q49AR2 442 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 PIK3R6Q5UE93 754 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 GPRIN1Q7Z2K8 1008 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 TMEM135Q86UB9 458 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 NPWQ8N729 165 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 ZMIZ2Q8NF64 920 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 OR10G2Q8NGC3 310 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 TRPV5Q9NQA5 729 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 GULP1Q9UBP9 304 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 A0A0D9SEW6 157 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 CA12O43570 354 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 OR1I1O60431 355 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 NOS1APO75052 506 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-204ENST00000397545 CLPXO76031 633 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 BMP10O95393 424 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 CLDN7O95471 211 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 ARSDP51689 593 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 RGS8P57771 180 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-204ENST00000397545 LGALS3BPQ08380 585 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 GNA13Q14344 377 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 UAP1L1Q3KQV9 507 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 C6orf136Q5SQH8 315 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 OR2T5Q6IEZ7 315 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 OTOP2Q7RTS6 562 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 SLC22A16Q86VW1 577 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 PACRGLQ8N7B6 248 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 OR2T29Q8NH02 315 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 POLE4Q9NR33 117 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 ZSCAN32Q9NX65 697 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 GDAP2Q9NXN4 497 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 ING4Q9UNL4 249 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 RNF11Q9Y3C5 154 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 A6NHS1 94 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 CHURC1-FNTBB4DL54 471 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 ANKRD66B4E2M5 251 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 M0QX08 132 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 MAGEB3O15480 346 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 LDB2O43679 373 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 DFNA5O60443 496 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 ERN1O75460 977 aaKnown RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 CCNB2O95067 398 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 RPLP0P05388 317 aaKnown RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 S100A1P23297 94 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 PAX3P23760 479 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 GKP32189 559 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 AP1S1P61966 158 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 COL9A2Q14055 689 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 TGFBIQ15582 683 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF829Q3KNS6 432 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 ANKRD26P1Q6NSI1 321 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 FAM124AQ86V42 546 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 LGI4Q8N135 537 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 GHDCQ8N2G8 530 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 CENPSQ8N2Z9 138 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 C2CD4AQ8NCU7 369 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 FBXO22Q8NEZ5 403 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 NPLOC4Q8TAT6 608 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 CXorf40BQ96DE9 158 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 YIPF4Q9BSR8 244 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 RUVBL1Q9Y265 456 aaKnown RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 PEX16Q9Y5Y5 336 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 ABHD14A-ACY1A0A1B0GW23 586 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 GSAPA4D1B5 854 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 SLC38A8A6NNN8 435 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 CREG1O75629 220 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 CSKP41240 450 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 APLP1P51693 650 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 STC1P52823 247 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 SRSF11Q05519 484 aaKnown RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 TARDBPQ13148 414 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 PCBP2Q15366 365 aaKnown RBP eCLIP10.51□□□□□ -0.735e-7■■■■■ 29.1
CCDC40-204ENST00000397545 MPPE1Q53F39 396 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 CES5AQ6NT32 575 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 CXXC5Q7LFL8 322 aaKnown RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 TCAIMQ8N3R3 496 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 KIAA1191Q96A73 305 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 PPP1R16AQ96I34 528 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 C8orf48Q96LL4 319 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 POLR2J3Q9H1A7 115 aaKnown RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 KCNK13Q9HB14 408 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 PCDHGA11Q9Y5H2 935 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 FABP12A6NFH5 140 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms