RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ACSL3O95573 720 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 FGF5P12034 268 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 RPA3P35244 121 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 ATP1A2P50993 1020 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 TUBB4BP68371 445 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 UAP1Q16222 522 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 SPACA3Q8IXA5 215 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 FAM20CQ8IXL6 584 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 C19orf47Q8N9M1 422 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 OR8K5Q8NH50 307 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 HMGCLL1Q8TB92 370 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 SLC12A9Q9BXP2 914 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 ULBP3Q9BZM4 244 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 GPAMQ9HCL2 828 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 SERTAD3Q9UJW9 196 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 ADAMTS6Q9UKP5 1117 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 FRYQ5TBA9 3013 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 FAM155BO75949 473 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 STK17BO94768 372 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 ITPKBP27987 946 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 ECHS1P30084 290 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 SP140Q13342 867 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 FASTKQ14296 549 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 EFTUD2Q15029 972 aaKnown RBP eCLIP24.46■■□□□ 1.512e-6■■■□□ 19.1
TSPAN4-207ENST00000397411 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 FLVCR1-AS1Q8TAF5 88 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 RNF31Q96EP0 1072 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 CCDC138Q96M89 665 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 MIPEPQ99797 713 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 CAB39LQ9H9S4 337 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 POPDC3Q9HBV1 291 aa24.46■■□□□ 1.51
TSPAN4-207ENST00000397411 TMEM150CB9EJG8 249 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 FKBP9O95302 570 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 SLC16A8O95907 504 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 STMN1P16949 149 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 CLN3Q13286 438 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 ZNF460Q14592 562 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 TGIF1Q15583 401 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 THEMIS2Q5TEJ8 643 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 C19orf48Q6RUI8 117 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 SUSD1Q6UWL2 747 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 CEP97Q8IW35 865 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 IL22RA1Q8N6P7 574 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 PDLIM5Q96HC4 596 aaKnown RBP24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 GPR22Q99680 433 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 MCMBPQ9BTE3 642 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 ACAT2Q9BWD1 397 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 IRAK4Q9NWZ3 460 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 PDE10AQ9Y233 779 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 KLHL20Q9Y2M5 609 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 IKBKGQ9Y6K9 419 aa24.45■■□□□ 1.5
TSPAN4-207ENST00000397411 RAD1O60671 282 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 KIAA0754O94854 1291 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 C1QAP02745 245 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 ZNF37AP17032 561 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 CMPK1P30085 196 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 MANEAQ5SRI9 462 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 FIGLAQ6QHK4 219 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 TMEM207Q6UWW9 146 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 RAPH1Q70E73 1250 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 TMEM126BQ8IUX1 230 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 CACNA2D3Q8IZS8 1091 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 NLGN4XQ8N0W4 816 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 PPFIBP2Q8ND30 876 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 NLGN4YQ8NFZ3 816 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 ZNF480Q8WV37 535 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 ZNF501Q96CX3 271 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 FCRL4Q96PJ5 515 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 SLC7A5P2Q9GIP4 190 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 ARL15Q9NXU5 204 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 SDK2Q58EX2 2172 aa24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 SNRNP200O75643 2136 aaKnown RBP24.44■■□□□ 1.5
TSPAN4-207ENST00000397411 ADAMTS20P59510 1910 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 PRICKLE3O43900 615 aaPredicted RBP24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 CCNDBP1O95273 360 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 TSPAN12O95859 305 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 CCNYL3P0C7X3 344 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 MAGP20916 626 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 PSMB5P28074 263 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 KIAA1614Q5VZ46 1190 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 PWWP2BQ6NUJ5 590 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 C6orf15Q6UXA7 325 aaPredicted RBP24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 CDHR3Q6ZTQ4 885 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 UHMK1Q8TAS1 419 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 DLG3Q92796 817 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 ZUFSPQ96AP4 578 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 ALKBH8Q96BT7 664 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 TWSG1Q9GZX9 223 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 ACSS3Q9H6R3 686 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 FAM60AQ9NP50 221 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 CTNNAL1Q9UBT7 734 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 PILRAQ9UKJ1 303 aa24.43■■□□□ 1.5
TSPAN4-207ENST00000397411 A0A087WUV0 522 aaPredicted RBP24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 PHGDHO43175 533 aaKnown RBP24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 SCRG1O75711 98 aa24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 ERGP11308 486 aa24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 ZNF28P17035 718 aa24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 NAA25Q14CX7 972 aa24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 ZIC1Q15915 447 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms