RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CNPY4Q8N129 248 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 RIBC1Q8N443 379 aaPredicted RBP14.07□□□□□ -0.16
SEC13-208ENST00000397109 RAB42Q8N4Z0 105 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 SKA2Q8WVK7 121 aaPredicted RBP14.07□□□□□ -0.16
SEC13-208ENST00000397109 RAD51AP1Q96B01 352 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 CATSPER2Q96P56 530 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 OR2A14Q96R47 310 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 NRTNQ99748 197 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 FAM167BQ9BTA0 163 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 CHRNA10Q9GZZ6 450 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 PLAC1Q9HBJ0 212 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 IL1RAPL1Q9NZN1 696 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 SERTAD3Q9UJW9 196 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 SLC39A10Q9ULF5 831 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 COMMD10Q9Y6G5 202 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 A0A0J9YY10 115 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 ISM1B1AKI9 464 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 CPNE3O75131 537 aaKnown RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 NIPSNAP2O75323 286 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 BANF1O75531 89 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 TIAF1O95411 115 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 MAGEA4P43358 317 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 FRG1Q14331 258 aaKnown RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 GBX1Q14549 363 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 FASTKD3Q14CZ7 662 aaKnown RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 RASA2Q15283 850 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 SLC5A12Q1EHB4 618 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 TTLL9Q3SXZ7 439 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 CRTC2Q53ET0 693 aaPredicted RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 SPANXN3Q5MJ09 141 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 CCDC25Q86WR0 208 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 TMEM126BQ8IUX1 230 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 UNC5BQ8IZJ1 945 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 ZBTB2Q8N680 514 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 TCTN2Q96GX1 697 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 CNOT10Q9H9A5 744 aaKnown RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 LHX9Q9NQ69 397 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 SPHK1Q9NYA1 384 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 FETUBQ9UGM5 382 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 KCND3Q9UK17 655 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 FBXO5Q9UKT4 447 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 PLAGL1Q9UM63 463 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 LOC400499M0QZD8 3231 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 RASGRF2O14827 1237 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 SHOX2O60902 331 aaPredicted RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 SCRG1O75711 98 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 FKBP9O95302 570 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 C1orf105O95561 183 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 PVRP15151 417 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 NR1D1P20393 614 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 CD9P21926 228 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 DLSTP36957 453 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 CTBP1Q13363 440 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 CRYMQ14894 314 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 HSP90AA5PQ58FG0 334 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 ZNF789Q5FWF6 425 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 TNFAIP8L3Q5GJ75 292 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 PCSK4Q6UW60 755 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 KCNMB4Q86W47 210 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 DENND6AQ8IWF6 608 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 ZBED8Q8IZ13 594 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 C19orf47Q8N9M1 422 aaKnown RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 FBXO36Q8NEA4 188 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 OR2L8Q8NGY9 312 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 N4BP2L2Q92802 583 aaPredicted RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 KCNJ9Q92806 393 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 TLCD1Q96CP7 247 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 LRFN5Q96NI6 719 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 ARHGAP9Q9BRR9 750 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 MENTQ9BUN1 341 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 SAYSD1Q9NPB0 183 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 FBXO6Q9NRD1 293 aaPredicted RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 ZC3H7BQ9UGR2 993 aaKnown RBP14.06□□□□□ -0.16
SEC13-208ENST00000397109 CROTQ9UKG9 612 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 CHMP2BQ9UQN3 213 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 PCDHB3Q9Y5E6 796 aa14.06□□□□□ -0.16
SEC13-208ENST00000397109 COL6A6A6NMZ7 2263 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 ATRXP46100 2492 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 A0A087WUV0 522 aaPredicted RBP14.05□□□□□ -0.16
SEC13-208ENST00000397109 C21orf140B9A014 251 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 TMEM150CB9EJG8 249 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 MATN4O95460 622 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 NTRK1P04629 796 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 KLK3P07288 261 aaPredicted RBP14.05□□□□□ -0.16
SEC13-208ENST00000397109 CYP2A7P20853 494 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 PHBP35232 272 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 SLC1A2P43004 574 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 ITGA1P56199 1179 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 GRB7Q14451 532 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 NEK10Q6ZWH5 1172 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 CYS1Q717R9 158 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 TAOK1Q7L7X3 1001 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 TRIM73Q86UV7 250 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 FLVCR1-AS1Q8TAF5 88 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 PYROXD1Q8WU10 500 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 STARD8Q92502 1023 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 FAM117AQ9C073 453 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 INTS7Q9NVH2 962 aaKnown RBP14.05□□□□□ -0.16
SEC13-208ENST00000397109 NINJ2Q9NZG7 142 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms