RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 FRA10AC1Q70Z53 315 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 C16orf59Q7L2K0 433 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 PPP3R2Q96LZ3 170 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 HHIPQ96QV1 700 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 MAGIXQ9H6Y5 334 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 LRTM1Q9HBL6 345 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 PABPN1LA6NDY0 278 aaKnown RBP13.57□□□□□ -0.24
NUP98-204ENST00000397004 K7ERQ8 282 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 IFRD1O00458 451 aaPredicted RBP13.57□□□□□ -0.24
NUP98-204ENST00000397004 SSX4O60224 188 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 PDYNP01213 254 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 IL6P05231 212 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 GNPDA1P46926 289 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 OR1G1P47890 313 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 SEMG2Q02383 582 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 RING1Q06587 406 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 ATXN7L2Q5T6C5 722 aaPredicted RBP13.57□□□□□ -0.24
NUP98-204ENST00000397004 ATG9BQ674R7 924 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 RASAL3Q86YV0 1011 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 AADATQ8N5Z0 425 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 OR6K2Q8NGY2 324 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 FUBP3Q96I24 572 aaKnown RBP eCLIP13.57□□□□□ -0.24
NUP98-204ENST00000397004 MAGEH1Q9H213 219 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 MAGEE1Q9HCI5 957 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 NMRK2Q9NPI5 230 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 ITM2CQ9NQX7 267 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 TRMT13Q9NUP7 481 aaKnown RBP13.57□□□□□ -0.24
NUP98-204ENST00000397004 ANKMY1Q9P2S6 941 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 ZBBXA8MT70 800 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 M0R3G1 203 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 STX7O15400 261 aaKnown RBP13.57□□□□□ -0.24
NUP98-204ENST00000397004 FZD6O60353 706 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 MSH3P20585 1137 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 GKP32189 559 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 ALDH7A1P49419 539 aaKnown RBP13.57□□□□□ -0.24
NUP98-204ENST00000397004 TPTEP56180 551 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 HUNKP57058 714 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 ZXDBP98169 803 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 EPS8Q12929 822 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 MBTPS1Q14703 1052 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 SF1Q15637 639 aaKnown RBP13.57□□□□□ -0.24
NUP98-204ENST00000397004 STEAP3Q658P3 488 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 DENND1CQ8IV53 801 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 HTRA1Q92743 480 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 VOPP1Q96AW1 172 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 TSSK3Q96PN8 268 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 PARK7Q99497 189 aaKnown RBP13.57□□□□□ -0.24
NUP98-204ENST00000397004 GABARAPL1Q9H0R8 117 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 IL1RAPQ9NPH3 570 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 BMPR1AP36894 532 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 SLC19A1P41440 591 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 TOP3AQ13472 1001 aaPredicted RBP13.57□□□□□ -0.24
NUP98-204ENST00000397004 CPSF6Q16630 551 aaKnown RBP eCLIP13.57□□□□□ -0.24
NUP98-204ENST00000397004 DOK6Q6PKX4 331 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 ENTHD1Q8IYW4 607 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 PSMA8Q8TAA3 256 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 STARD8Q92502 1023 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 AMBNQ9NP70 447 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 Q9Y3F1 56 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 ZNF451Q9Y4E5 1061 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 OARD1Q9Y530 152 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 PCDHB9Q9Y5E1 797 aa13.57□□□□□ -0.24
NUP98-204ENST00000397004 DNAH14Q0VDD8 3507 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 FRMPD3Q5JV73 1810 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 SCN8AQ9UQD0 1980 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 F5H5T6 163 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 NBNO60934 754 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 ULK1O75385 1050 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 DNAJB5O75953 348 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 ZNF682O95780 498 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 GTF2H3Q13889 308 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 MRPL58Q14197 206 aaKnown RBP13.56□□□□□ -0.24
NUP98-204ENST00000397004 PTOV1Q86YD1 416 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 ZNF540Q8NDQ6 660 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 APIPQ96GX9 242 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 SEPT5Q99719 369 aaPredicted RBP13.56□□□□□ -0.24
NUP98-204ENST00000397004 LHX3Q9UBR4 397 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 MAN2B2Q9Y2E5 1009 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 PCDHB5Q9Y5E4 795 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 MTMR11A4FU01 709 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 ACSL4O60488 711 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 EFNA1P20827 205 aaPredicted RBP13.56□□□□□ -0.24
NUP98-204ENST00000397004 LIMK1P53667 647 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 GPR155Q7Z3F1 870 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 SERPINA9Q86WD7 417 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 NLGN4XQ8N0W4 816 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 SLC25A14O95258 325 aaPredicted RBP13.56□□□□□ -0.24
NUP98-204ENST00000397004 KCNK5O95279 499 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 VIPP01282 170 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 CD36P16671 472 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 SDC1P18827 310 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 MZF1P28698 734 aaPredicted RBP13.56□□□□□ -0.24
NUP98-204ENST00000397004 GSSP48637 474 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 SEPHS1P49903 392 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 DUSP4Q13115 394 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 NCEH1Q6PIU2 408 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 AHSA2Q719I0 299 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 UTS2BQ765I0 119 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 TMEM173Q86WV6 379 aaPredicted RBP13.56□□□□□ -0.24
NUP98-204ENST00000397004 HIPK1Q86Z02 1210 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms