RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 SF1Q15637 639 aaKnown RBP10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 HIF1AQ16665 826 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 KCTD19Q17RG1 926 aaPredicted RBP10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 ZC3H12BQ5HYM0 836 aaKnown RBP10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 TLDC1Q6P9B6 456 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 FBXO38Q6PIJ6 1188 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 KCNMB4Q86W47 210 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 KLHL7Q8IXQ5 586 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 UNC5BQ8IZJ1 945 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 DSELQ8IZU8 1212 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 ZNF843Q8N446 348 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 SLC38A9Q8NBW4 561 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 OR9A1PQ8NGU1 263 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 OR1L3Q8NH93 324 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 SKA2Q8WVK7 121 aaPredicted RBP10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 APOBEC4Q8WW27 367 aaKnown RBP10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 ASB11Q8WXH4 323 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 N4BP2L2Q92802 583 aaPredicted RBP10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 NRTNQ99748 197 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 NLNQ9BYT8 704 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 ACTR5Q9H9F9 607 aaPredicted RBP10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 PLCL2Q9UPR0 1127 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 FARSAQ9Y285 508 aaKnown RBP10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 MED16Q9Y2X0 877 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 TEX264Q9Y6I9 313 aa10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 USP9XQ93008 2570 aaPredicted RBP10.69□□□□□ -0.7
NDUFA9-202ENST00000396655 FAM187AA6NFU0 413 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 E7ESA3 106 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 MYO1CO00159 1063 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 TP73O15350 636 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 TTI1O43156 1089 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 SRPX2O60687 465 aaPredicted RBP10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 VPS26AO75436 327 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 HAUS5O94927 633 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 PVRP15151 417 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 OAS2P29728 719 aaKnown RBP10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 CASQ1P31415 396 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 ARL4CP56559 192 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 CYP4F2P78329 520 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 GPS2Q13227 327 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 ZIC1Q15915 447 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 KLHL38Q2WGJ6 581 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 MSS51Q4VC12 460 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 ACSBG2Q5FVE4 666 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 YOD1Q5VVQ6 348 aaPredicted RBP10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 STEAP4Q687X5 459 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 RHBDD2Q6NTF9 364 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 ZNF549Q6P9A3 640 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 SYVN1Q86TM6 617 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 EXD3Q8N9H8 876 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 SPATA4Q8NEY3 305 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 OR2A1Q8NGT9 310 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 PROKR1Q8TCW9 393 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 CT55Q8WUE5 264 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 THAP4Q8WY91 577 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 CLIP3Q96DZ5 547 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 CERS2Q96G23 380 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 ERP44Q9BS26 406 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 AARSD1Q9BTE6 412 aaKnown RBP10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 DHRS4Q9BTZ2 278 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 FAM60AQ9NP50 221 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 FBXO6Q9NRD1 293 aaPredicted RBP10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 STARD5Q9NSY2 213 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 PCMTD2Q9NV79 361 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 TAS2R13Q9NYV9 303 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 IL1RAPL1Q9NZN1 696 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 WHRNQ9P202 907 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 GALPQ9UBC7 116 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 ZC3H7BQ9UGR2 993 aaKnown RBP10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 PLAGL1Q9UM63 463 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 SRPK3Q9UPE1 567 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 POLHQ9Y253 713 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 NFS1Q9Y697 457 aa10.68□□□□□ -0.7
NDUFA9-202ENST00000396655 EFCAB8A8MWE9 144 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 B8ZZF3 427 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 ZNF749O43361 778 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 ZBTB14O43829 449 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 OR2B3O76000 313 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 ONECUT2O95948 504 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 AHSGP02765 367 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 ERVK-10P10266 1014 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 AGXTP21549 392 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 RGS4P49798 205 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 ITGA8P53708 1063 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 ARSFP54793 590 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 LY6DQ14210 128 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 UGT8Q16880 541 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 BBS9Q3SYG4 887 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 TCTE1Q5JU00 501 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 TEDDM1Q5T9Z0 273 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 CNSTQ6PJW8 725 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 FIGLAQ6QHK4 219 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 CYHR1Q6ZMK1 362 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 CYS1Q717R9 158 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 ZNF572Q7Z3I7 529 aaPredicted RBP10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 TRIM73Q86UV7 250 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 MCATQ8IVS2 390 aaKnown RBP10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 IGDCC3Q8IVU1 814 aa10.67□□□□□ -0.7
NDUFA9-202ENST00000396655 APLFQ8IW19 511 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms