RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CXCR2P25025 360 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 OR1E1P30953 314 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 RYKP34925 604 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 DEFA1P59665 94 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 DEFA3P59666 94 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 DMC1Q14565 340 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 CPSF6Q16630 551 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 DDR2Q16832 855 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SPATS1Q496A3 300 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 CCDC58Q4VC31 144 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF648Q5T619 568 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 DOK6Q6PKX4 331 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 TRAF7Q6Q0C0 670 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 GOLGA7Q7Z5G4 137 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 GALNT12Q8IXK2 581 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 MSRB3Q8IXL7 192 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 DPP10Q8N608 796 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ARRDC2Q8TBH0 407 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 TRIB2Q92519 343 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SLC38A4Q969I6 547 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ULK4Q96C45 1275 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 CENPOQ9BU64 300 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 NUSAP1Q9BXS6 441 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 DUSP21Q9H596 190 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 GORASP2Q9H8Y8 452 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 MOV10Q9HCE1 1003 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 DCAF13Q9NV06 445 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 FKBPLQ9UIM3 349 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 AGO1Q9UL18 857 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 BTBD3Q9Y2F9 522 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 WBP11Q9Y2W2 641 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 MED16Q9Y2X0 877 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 KRT87PA6NCN2 255 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 TLL1O43897 1013 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 PCDHGA12O60330 932 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 SCELO95171 688 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 PEX11BO96011 259 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 THP07101 528 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 CHRM5P08912 532 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 KCNE1P15382 129 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 CTSKP43235 329 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 MLLT6P55198 1093 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 CPZQ66K79 652 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 ASCC1Q8N9N2 400 aaKnown RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 LPCAT1Q8NF37 534 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 IGSF8Q969P0 613 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 DPH2Q9BQC3 489 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 ITPAQ9BY32 194 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 KATNBL1Q9H079 304 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 MMP27Q9H306 513 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 TRPV5Q9NQA5 729 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 MOSPD1Q9UJG1 213 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 OSGIN1Q9UJX0 560 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 Q9Y3F1 56 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 PCDHGC4Q9Y5F7 938 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 PABPN1LA6NDY0 278 aaKnown RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 CPSF4O95639 269 aaKnown RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 EIF2S1P05198 315 aaKnown RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 MMP3P08254 477 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 STSP08842 583 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 PKMP14618 531 aaKnown RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 POU2F1P14859 743 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 PCSK1P29120 753 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 GPR15P49685 360 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF33AQ06730 810 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 GTF2H2Q13888 395 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 MAD2L1BPQ15013 274 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 C1orf53Q5VUE5 145 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 PDE12Q6L8Q7 609 aaKnown RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 GTF2H2CQ6P1K8 395 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 NRARPQ7Z6K4 114 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 CCDC117Q8IWD4 279 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 IQCF2Q8IXL9 164 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 FAM217AQ8IXS0 508 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 RAET1EQ8TD07 263 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 UBASH3BQ8TF42 649 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 TTPALQ9BTX7 342 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 ABCC13Q9NSE7 274 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 C1orf109Q9NX04 203 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF490Q9ULM2 529 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-203ENST00000396547 PCDHGB6Q9Y5F9 930 aa9.6□□□□□ -0.87
TRIM39-203ENST00000396547 LTBP2Q14767 1821 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 METTL15A6NJ78 407 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 KMOO15229 486 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 SLC16A6O15403 523 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 RAMP2O60895 175 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CHRNB1P11230 501 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 MC4RP32245 332 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 TGFBR2P37173 567 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 CDKN2CP42773 168 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF135P52742 658 aaPredicted RBP9.59□□□□□ -0.87
TRIM39-203ENST00000396547 GRIK2Q13002 908 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF181Q2M3W8 571 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 ARMC4Q5T2S8 1044 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 OR2T5Q6IEZ7 315 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 STX19Q8N4C7 294 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 OR8J3Q8NGG0 315 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 OR2T29Q8NH02 315 aa9.59□□□□□ -0.87
TRIM39-203ENST00000396547 BRSK1Q8TDC3 778 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms