RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 TUBB3Q13509 450 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 FASTKQ14296 549 aaKnown RBP17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 TMTC4Q5T4D3 741 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 TAX1BP1Q86VP1 789 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 BPHLQ86WA6 291 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 DTX1Q86Y01 620 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 LRRC56Q8IYG6 542 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 ZNF480Q8WV37 535 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 ANKRD49Q8WVL7 239 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 ZNF501Q96CX3 271 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 TSPAN17Q96FV3 270 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 TXLNGYQ9BZA5 131 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 CAB39LQ9H9S4 337 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 PARVBQ9HBI1 364 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 FGF21Q9NSA1 209 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 SOHLH2Q9NX45 425 aa17.15■□□□□ 0.34
TNFSF13-204ENST00000396542 PCM1Q15154 2024 aa17.14■□□□□ 0.34
TNFSF13-204ENST00000396542 LAMA5O15230 3695 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 ZNF839A8K0R7 811 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 FAM153BP0C7A2 387 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 STMN1P16949 149 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 CYP2A7P20853 494 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 OAS2P29728 719 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 PNLIPRP1P54315 467 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 SLC12A2P55011 1212 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 TUBB4BP68371 445 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 USP10Q14694 798 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 ZIC1Q15915 447 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 PHKG1Q16816 387 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 FAM153CQ494X1 144 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 TRMT10CQ7L0Y3 403 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 ZFAND4Q86XD8 727 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 C19orf47Q8N9M1 422 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 OR2A1Q8NGT9 310 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 MCOLN3Q8TDD5 553 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 SMPDL3AQ92484 453 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 TCTN2Q96GX1 697 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 DPH1Q9BZG8 443 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 KLHL25Q9H0H3 589 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 ANKZF1Q9H8Y5 726 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 GPAMQ9HCL2 828 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 PDE7BQ9NP56 450 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 IKZF3Q9UKT9 509 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 SSUH2Q9Y2M2 353 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 KLK4Q9Y5K2 254 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 PKD1L2Q7Z442 2459 aa17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 URB1O60287 2271 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-204ENST00000396542 HMX2A2RU54 273 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 E7ENX8 843 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 STMND1H3BQB6 276 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 SYF2O95926 243 aaKnown RBP17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 ABHD2P08910 425 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 ENO2P09104 434 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 MYBL2P10244 700 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 LIPCP11150 499 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 IMPA1P29218 277 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 GABRA4P48169 554 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 RAB10P61026 200 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 TAP2Q03519 686 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 CLN3Q13286 438 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 SF1Q15637 639 aaKnown RBP17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 GPR19Q15760 415 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 PPP1R3AQ16821 1122 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 SBSNQ6UWP8 590 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 CDHR3Q6ZTQ4 885 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 PPP1R3BQ86XI6 285 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 OR8K5Q8NH50 307 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 KCNE4Q8WWG9 221 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 CCDC138Q96M89 665 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 FCRL4Q96PJ5 515 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 FAM60AQ9NP50 221 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 STOX2Q9P2F5 926 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 PILRAQ9UKJ1 303 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 NOVA2Q9UNW9 492 aaKnown RBP17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 TMEM184BQ9Y519 407 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 AHCTF1Q8WYP5 2266 aa17.13■□□□□ 0.33
TNFSF13-204ENST00000396542 ANKRD12Q6UB98 2062 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 A0A087WUV0 522 aaPredicted RBP17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 RRP8O43159 456 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 PHGDHO43175 533 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 MAP3K7O43318 606 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 SLU7O95391 586 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 DLGAP3O95886 979 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 MAGP20916 626 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 PSMB5P28074 263 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 CSRP3P50461 194 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 PMS2P54278 862 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 AP1S2P56377 157 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 KIAA1614Q5VZ46 1190 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 FAM20CQ8IXL6 584 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 GSPT2Q8IYD1 628 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 OR2L3Q8NG85 312 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 SLC44A1Q8WWI5 657 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 UBXN10Q96LJ8 280 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 DCBLD2Q96PD2 775 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 DERL2Q9GZP9 239 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 RARRES3Q9UL19 164 aa17.12■□□□□ 0.33
TNFSF13-204ENST00000396542 TARM1B6A8C7 271 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms