RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 KRTCAP2Q8N6L1 136 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 CLHC1Q8NHS4 586 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 RAB7BQ96AH8 199 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 ZNF514Q96K75 400 aaPredicted RBP14.53□□□□□ -0.08
CBX3-202ENST00000396386 PKP4Q99569 1192 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 HDAC8Q9BY41 377 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 CXorf56Q9H5V9 222 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 YY1AP1Q9H869 796 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 THAP10Q9P2Z0 257 aaPredicted RBP14.53□□□□□ -0.08
CBX3-202ENST00000396386 DLGAP4Q9Y2H0 992 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 NEUROG3Q9Y4Z2 214 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 PCDHB3Q9Y5E6 796 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 LAMA3Q16787 3333 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 H0YJX3 145 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 DENRO43583 198 aaKnown RBP14.52□□□□□ -0.08
CBX3-202ENST00000396386 LILRB5O75023 590 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 PGRP06401 933 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 IMPA1P29218 277 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 EIF2DP41214 584 aaKnown RBP14.52□□□□□ -0.08
CBX3-202ENST00000396386 P2RY2P41231 377 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 CLDN8P56748 225 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 MTPNP58546 118 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 NAE1Q13564 534 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 MAPKAPK3Q16644 382 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 CCSMST1Q4G0I0 132 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 GRHL2Q6ISB3 625 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 GALNT4Q8N4A0 578 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 MARVELD2Q8N4S9 558 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 ANKFN1Q8N957 763 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 FBXO15Q8NCQ5 510 aaPredicted RBP14.52□□□□□ -0.08
CBX3-202ENST00000396386 OR56A3Q8NH54 315 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 NUDT8Q8WV74 236 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 GTF2H4Q92759 462 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 FOXJ1Q92949 421 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 MYCBPQ99417 103 aaPredicted RBP14.52□□□□□ -0.08
CBX3-202ENST00000396386 PBX4Q9BYU1 374 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 TRIM39Q9HCM9 518 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 PRSS16Q9NQE7 514 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 PDP2Q9P2J9 529 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.52□□□□□ -0.08
CBX3-202ENST00000396386 AP4B1Q9Y6B7 739 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 DOCK8Q8NF50 2099 aa14.52□□□□□ -0.08
CBX3-202ENST00000396386 TCRBV5S2A0A599 114 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 KANSL1LA0AUZ9 987 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 DPPA5A6NC42 116 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 E7EQ34 232 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 DFNA5O60443 496 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 KAT7O95251 611 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 FCGR1AP12314 374 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 NCK1P16333 377 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 PDHA2P29803 388 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 OXTRP30559 389 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 HNF4AP41235 474 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 OR4D2P58180 307 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 SELPLGQ14242 412 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 CYP51A1Q16850 503 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 FAM46CQ5VWP2 391 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 EGFLAMQ63HQ2 1017 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 CAPRIN2Q6IMN6 1127 aaKnown RBP14.52□□□□□ -0.09
CBX3-202ENST00000396386 AMIGO2Q86SJ2 522 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 DNAJB8Q8NHS0 232 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 CSGALNACT1Q8TDX6 532 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 ANAPC2Q9UJX6 822 aa14.52□□□□□ -0.09
CBX3-202ENST00000396386 NPC1O15118 1278 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 VEGFDO43915 354 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 C1orf105O95561 183 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 SLC16A8O95907 504 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 UMPSP11172 480 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 PIM1P11309 404 aaPredicted RBP14.51□□□□□ -0.09
CBX3-202ENST00000396386 BMP2P12643 396 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 ZNF26P17031 533 aaPredicted RBP14.51□□□□□ -0.09
CBX3-202ENST00000396386 SDC1P18827 310 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 CD22P20273 847 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 HRH2P25021 359 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 MAGEA10P43363 369 aaPredicted RBP14.51□□□□□ -0.09
CBX3-202ENST00000396386 PLIN5Q00G26 463 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 CNTN1Q12860 1018 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 DOC2AQ14183 400 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 PLA2G4EQ3MJ16 856 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 RALGPS2Q86X27 583 aaPredicted RBP14.51□□□□□ -0.09
CBX3-202ENST00000396386 CFAP206Q8IYR0 622 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 AADATQ8N5Z0 425 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 FAM110BQ8TC76 370 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 HM13Q8TCT9 377 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 FCRL1Q96LA6 429 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 LINC00615Q96LM1 132 aaPredicted RBP14.51□□□□□ -0.09
CBX3-202ENST00000396386 OR52E6Q96RD3 313 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 COQ10BQ9H8M1 238 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 ZDHHC4Q9NPG8 344 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 VAPAQ9P0L0 249 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 ATXN10Q9UBB4 475 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 GULP1Q9UBP9 304 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 USP22Q9UPT9 525 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 AP3M1Q9Y2T2 418 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 FADS3Q9Y5Q0 445 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 CHD7Q9P2D1 2997 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 TRIOBPQ9H2D6 2365 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 CKAP5Q14008 2032 aa14.51□□□□□ -0.09
CBX3-202ENST00000396386 EPOPA6NHQ4 379 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 APODP05090 189 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms