RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 RASSF9O75901 435 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 MT-CO3P00414 261 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 C9P02748 559 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 TPBGLP0DKB5 382 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 TAC1P20366 129 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 IMPA1P29218 277 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 TSTA3Q13630 321 aaPredicted RBP20.61■□□□□ 0.89
FXN-202ENST00000396364 OR4D1Q15615 310 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 CCDC153Q494R4 210 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 HES3Q5TGS1 186 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 CAPN13Q6MZZ7 669 aaPredicted RBP20.61■□□□□ 0.89
FXN-202ENST00000396364 SPNS2Q8IVW8 549 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 PLD6Q8N2A8 252 aaKnown RBP20.61■□□□□ 0.89
FXN-202ENST00000396364 DENND1AQ8TEH3 1009 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 EXT2Q93063 718 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 NUDT22Q9BRQ3 303 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 WWOXQ9NZC7 414 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 MID2Q9UJV3 735 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 POMT2Q9UKY4 750 aa20.61■□□□□ 0.89
FXN-202ENST00000396364 ANKRD12Q6UB98 2062 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 GFAPP14136 432 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 JUPP14923 745 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 CDH3P22223 829 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 CSF2RBP32927 897 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 CRHR1P34998 444 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 ARL4DP49703 201 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 INHBCP55103 352 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 SLC18A2Q05940 514 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 SF1Q15637 639 aaKnown RBP20.6■□□□□ 0.89
FXN-202ENST00000396364 SLC5A12Q1EHB4 618 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 TECRLQ5HYJ1 363 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 PHF19Q5T6S3 580 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 CDCP2Q5VXM1 449 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 SPESP1Q6UW49 350 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 C4orf33Q8N1A6 199 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 PDPRQ8NCN5 879 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 MED8Q96G25 268 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 GPR78Q96P69 363 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 ATOH8Q96SQ7 321 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 MIPEPQ99797 713 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 C1GALT1Q9NS00 363 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 MKS1Q9NXB0 559 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 XPR1Q9UBH6 696 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 IKZF3Q9UKT9 509 aa20.6■□□□□ 0.89
FXN-202ENST00000396364 NCF1BA6NI72 391 aaPredicted RBP20.59■□□□□ 0.89
FXN-202ENST00000396364 NCF1CA8MVU1 366 aaPredicted RBP20.59■□□□□ 0.89
FXN-202ENST00000396364 E7ENX8 843 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 NCF1P14598 390 aaPredicted RBP20.59■□□□□ 0.89
FXN-202ENST00000396364 PRDX3P30048 256 aaKnown RBP20.59■□□□□ 0.89
FXN-202ENST00000396364 CMPK1P30085 196 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 CCKBRP32239 447 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 TAP2Q03519 686 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 CACHD1Q5VU97 1274 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 CYB5D1Q6P9G0 228 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 DGLUCYQ7Z3D6 616 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 PRSS42Q7Z5A4 293 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 TAX1BP1Q86VP1 789 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 KMT5CQ86Y97 462 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 LINC01555Q8NAE3 123 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 APOPT1Q96IL0 206 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 HAUS8Q9BT25 410 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 KLHL3Q9UH77 587 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 ACTL7BQ9Y614 415 aa20.59■□□□□ 0.89
FXN-202ENST00000396364 IGHV5-10-1A0A0J9YXX1 117 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 A0A0J9YY10 115 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 HGSO14964 777 aaPredicted RBP20.58■□□□□ 0.89
FXN-202ENST00000396364 ANKRD34CP0C6C1 535 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 THRAP10827 490 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 UGT2B7P16662 529 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 GMPRP36959 345 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 TBPL1P62380 186 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 ABATP80404 500 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 EIF3IQ13347 325 aaKnown RBP20.58■□□□□ 0.89
FXN-202ENST00000396364 NAE1Q13564 534 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 SNAP47Q5SQN1 464 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 PRAMEF13Q5VWM6 474 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 MBOAT1Q6ZNC8 495 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 FAM92BQ6ZTR7 304 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 RAB44Q7Z6P3 723 aaPredicted RBP20.58■□□□□ 0.89
FXN-202ENST00000396364 FBXO39Q8N4B4 442 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 C2orf73Q8N5S3 287 aaPredicted RBP20.58■□□□□ 0.89
FXN-202ENST00000396364 RHBDF1Q96CC6 855 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 ATG10Q9H0Y0 220 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 ZNF358Q9NW07 568 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 CPSF2Q9P2I0 782 aaKnown RBP20.58■□□□□ 0.89
FXN-202ENST00000396364 PDP2Q9P2J9 529 aa20.58■□□□□ 0.89
FXN-202ENST00000396364 TNPO3Q9Y5L0 923 aaKnown RBP20.58■□□□□ 0.89
FXN-202ENST00000396364 CFAP54Q96N23 3096 aa20.58■□□□□ 0.88
FXN-202ENST00000396364 KRT87PA6NCN2 255 aa20.57■□□□□ 0.88
FXN-202ENST00000396364 UBXN8O00124 270 aa20.57■□□□□ 0.88
FXN-202ENST00000396364 CSO75390 466 aaKnown RBP20.57■□□□□ 0.88
FXN-202ENST00000396364 ZBTB11O95625 1053 aaPredicted RBP20.57■□□□□ 0.88
FXN-202ENST00000396364 HOXB3P14651 431 aaPredicted RBP20.57■□□□□ 0.88
FXN-202ENST00000396364 HRH2P25021 359 aa20.57■□□□□ 0.88
FXN-202ENST00000396364 CSTF2P33240 577 aaKnown RBP eCLIP20.57■□□□□ 0.889e-8■■■■□ 22.8
FXN-202ENST00000396364 ALDH18A1P54886 795 aaKnown RBP20.57■□□□□ 0.88
FXN-202ENST00000396364 GFERP55789 205 aa20.57■□□□□ 0.88
FXN-202ENST00000396364 CFHR1Q03591 330 aa20.57■□□□□ 0.88
FXN-202ENST00000396364 ZFP36L1Q07352 338 aaKnown RBP20.57■□□□□ 0.88
FXN-202ENST00000396364 ISXQ2M1V0 245 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms