RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 DLG1Q12959 904 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 TSTA3Q13630 321 aaPredicted RBP18.54■□□□□ 0.56
HOXA9-202ENST00000396345 PPP1R3AQ16821 1122 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 SLC5A12Q1EHB4 618 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 FRA10AC1Q70Z53 315 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 TRIM73Q86UV7 250 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 KMT5CQ86Y97 462 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 CNPY4Q8N129 248 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 MREGQ8N565 214 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 NXPE2Q96DL1 559 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 PITPNM3Q9BZ71 974 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 VPS11Q9H270 941 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 NMRAL1Q9HBL8 299 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 IGSF5Q9NSI5 407 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 OCIAD1Q9NX40 245 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 UTP6Q9NYH9 597 aaKnown RBP18.54■□□□□ 0.56
HOXA9-202ENST00000396345 STOX2Q9P2F5 926 aaPredicted RBP18.54■□□□□ 0.56
HOXA9-202ENST00000396345 PISDQ9UG56 409 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 OARD1Q9Y530 152 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 PCDHGA8Q9Y5G5 932 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 AK5Q9Y6K8 562 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 A0A0J9YY10 115 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 A0A1W2PPV9 198 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 SLC9B1P1A6NJY1 282 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 E7ENX8 843 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 PRICKLE3O43900 615 aaPredicted RBP18.53■□□□□ 0.56
HOXA9-202ENST00000396345 ZBTB11O95625 1053 aaPredicted RBP18.53■□□□□ 0.56
HOXA9-202ENST00000396345 GUCA1CO95843 209 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 NUDT17P0C025 328 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 CCL4P13236 92 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 IRF9Q00978 393 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 TAP2Q03519 686 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 RTP5Q14D33 572 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 SF1Q15637 639 aaKnown RBP18.53■□□□□ 0.56
HOXA9-202ENST00000396345 FAM83EQ2M2I3 478 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 SUSD1Q6UWL2 747 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 TIFABQ6ZNK6 161 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 FAM129CQ86XR2 697 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 CENPLQ8N0S6 344 aaPredicted RBP18.53■□□□□ 0.56
HOXA9-202ENST00000396345 PPFIBP2Q8ND30 876 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 KCTD4Q8WVF5 259 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 NXNL1Q96CM4 212 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 SLC41A2Q96JW4 573 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 TRAPPC9Q96Q05 1148 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 TBK1Q9UHD2 729 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 PCDHB11Q9Y5F2 797 aa18.53■□□□□ 0.56
HOXA9-202ENST00000396345 PCM1Q15154 2024 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 B4E171 279 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 KLHL2O95198 593 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 FGF3P11487 239 aaPredicted RBP18.52■□□□□ 0.56
HOXA9-202ENST00000396345 PVRP15151 417 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 ST6GAL1P15907 406 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 ITIH1P19827 911 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 PSMB5P28074 263 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 RPA3P35244 121 aaPredicted RBP18.52■□□□□ 0.56
HOXA9-202ENST00000396345 TSPAN7P41732 249 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 SLCO1A2P46721 670 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 MAPK10P53779 464 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 HSD11B2P80365 405 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 OR4D1Q15615 310 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 AGTRAPQ6RW13 159 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 TDRPQ86YL5 185 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 GPSM1Q86YR5 675 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 FAM20CQ8IXL6 584 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 LRRC56Q8IYG6 542 aaPredicted RBP18.52■□□□□ 0.56
HOXA9-202ENST00000396345 OR2W6PQ8NHA6 318 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 EPS8L3Q8TE67 593 aaKnown RBP18.52■□□□□ 0.56
HOXA9-202ENST00000396345 ATL1Q8WXF7 558 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 KIAA1191Q96A73 305 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 PTERQ96BW5 349 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 FBXL8Q96CD0 374 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 PRR11Q96HE9 360 aaPredicted RBP18.52■□□□□ 0.56
HOXA9-202ENST00000396345 KLHL25Q9H0H3 589 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 ALG9Q9H6U8 611 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 SOHLH2Q9NX45 425 aa18.52■□□□□ 0.56
HOXA9-202ENST00000396345 SNRNP200O75643 2136 aaKnown RBP18.52■□□□□ 0.55
HOXA9-202ENST00000396345 SMIM23A6NLE4 172 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 MAP3K7O43318 606 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 ERLIN1O75477 346 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 RFPL1O75677 317 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 TNFSF15O95150 251 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 FKBP9O95302 570 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 ANXA5P08758 320 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 TFEBP19484 476 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 RBMS1P29558 406 aaKnown RBP18.51■□□□□ 0.55
HOXA9-202ENST00000396345 ETV5P41161 510 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 SH3BP2P78314 561 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 CDKL1Q00532 357 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 IFFO1Q0D2I5 559 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 TMTC4Q5T4D3 741 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 ISCA2Q86U28 154 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 LSMEM2Q8N112 164 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 D2HGDHQ8N465 521 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 BMPERQ8N8U9 685 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 OR2A1Q8NGT9 310 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 STAG3L4Q8TBR4 150 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 GATA6Q92908 595 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 MED8Q96G25 268 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 CABS1Q96KC9 395 aa18.51■□□□□ 0.55
HOXA9-202ENST00000396345 MIPEPQ99797 713 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms