RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 IMMP1LQ96LU5 166 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 SIGLEC12Q96PQ1 595 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 HGH1Q9BTY7 390 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 POLDIP3Q9BY77 421 aaKnown RBP13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 SLC25A51Q9H1U9 297 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 TRABDQ9H4I3 376 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 KCNJ16Q9NPI9 418 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 RASSF1Q9NS23 344 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 STMN3Q9NZ72 180 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 PHF3Q92576 2039 aaKnown RBP13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 SCN2AQ99250 2005 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 FAM237BA0A1B0GVD1 139 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 LOC285095A0A1B0GVY8 99 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 FAM90A27PA6NNH2 459 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 PRRG2O14669 202 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 TPOP07202 933 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 RAB28P51157 221 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 NOMO1Q15155 1222 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 PCSK7Q16549 785 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 CCDC122Q5T0U0 273 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 ABHD17BQ5VST6 288 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 CNSTQ6PJW8 725 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 NAPRTQ6XQN6 538 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 NEK10Q6ZWH5 1172 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 IRF2BP2Q7Z5L9 587 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 HOOK3Q86VS8 718 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 SPATA22Q8NHS9 363 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 RIC8BQ9NVN3 520 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 IRAK4Q9NWZ3 460 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 TAB2Q9NYJ8 693 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 OR6C2Q9NZP2 312 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 LRFN1Q9P244 771 aa13.01□□□□□ -0.33
VCPKMT-201ENST00000395859 DNAJC13O75165 2243 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 SMTNL1A8MU46 457 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 TMCO5BA8MYB1 307 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 TTI1O43156 1089 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 ATE1O95260 518 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 MX2P20592 715 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 MAGP20916 626 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 EEF1GP26641 437 aaKnown RBP13□□□□□ -0.33
VCPKMT-201ENST00000395859 AKT1P31749 480 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 SHMT2P34897 504 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 EFNA3P52797 238 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 TPM4P67936 248 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 EEF1A2Q05639 463 aaKnown RBP13□□□□□ -0.33
VCPKMT-201ENST00000395859 TUBA3CQ13748 450 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 GRM7Q14831 915 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 TFDP3Q5H9I0 405 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 H3F3CQ6NXT2 135 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 TUBA3EQ6PEY2 450 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 PAMR1Q6UXH9 720 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 CEP128Q6ZU80 1094 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 METTL27Q8N6F8 245 aaPredicted RBP13□□□□□ -0.33
VCPKMT-201ENST00000395859 NIPA2Q8N8Q9 360 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 LRRN4CLQ8ND94 238 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 FAM57AQ8TBR7 257 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 ZNF398Q8TD17 642 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 TFGQ92734 400 aaPredicted RBP13□□□□□ -0.33
VCPKMT-201ENST00000395859 MIEF2Q96C03 454 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 RMND5BQ96G75 393 aaPredicted RBP13□□□□□ -0.33
VCPKMT-201ENST00000395859 GPATCH1Q9BRR8 931 aaKnown RBP13□□□□□ -0.33
VCPKMT-201ENST00000395859 CEP41Q9BYV8 373 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 ZNF700Q9H0M5 742 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 RBSNQ9H1K0 784 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 CLEC4MQ9H2X3 399 aaPredicted RBP13□□□□□ -0.33
VCPKMT-201ENST00000395859 MAU2Q9Y6X3 613 aa13□□□□□ -0.33
VCPKMT-201ENST00000395859 FAM171A2A8MVW0 826 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 ZNF33BQ06732 778 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 DEFB113Q30KQ7 82 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 TMEM205Q6UW68 189 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 CDC20BQ86Y33 519 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 PRSS58Q8IYP2 241 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 RPRMLQ8N4K4 120 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 TAB3Q8N5C8 712 aaPredicted RBP12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 CPSF7Q8N684 471 aaKnown RBP12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 OR5AR1Q8NGP9 310 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 COX4I2Q96KJ9 171 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 NPAS2Q99743 824 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 ZNF282Q9UDV7 671 aaPredicted RBP12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 KLHL20Q9Y2M5 609 aa12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 SONP18583 2426 aaKnown RBP12.99□□□□□ -0.33
VCPKMT-201ENST00000395859 IDSB3KWA1 339 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 IFRD1O00458 451 aaPredicted RBP12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 GZMAP12544 262 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 ACADLP28330 430 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 PCSK6P29122 969 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 CD96P40200 585 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 DGKQP52824 942 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 OCA2Q04671 838 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 RPA4Q13156 261 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 KRT81Q14533 505 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 PTPRCAPQ14761 206 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 KIR2DS3Q14952 304 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 DPCR1Q3MIW9 517 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 TCTE1Q5JU00 501 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 KDELC1Q6UW63 502 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 ARHGEF18Q6ZSZ5 1173 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 CCDC71Q8IV32 467 aaPredicted RBP12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 BEST3Q8N1M1 668 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 ZNF670Q9BS34 389 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms