RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 USP1O94782 785 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 CATP04040 527 aaKnown RBP13.22□□□□□ -0.29
CXCL12-205ENST00000395794 ALAS2P22557 587 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 CASRP41180 1078 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 BDKRB1P46663 353 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 CCL11P51671 97 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 ARSFP54793 590 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 KLRB1Q12918 225 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 NAA25Q14CX7 972 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 FIGLAQ6QHK4 219 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 FAM198BQ6UWH4 519 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 CENPUQ71F23 418 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 NAT8LQ8N9F0 302 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 ZUFSPQ96AP4 578 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 MENTQ9BUN1 341 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 ING2Q9H160 280 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 IL1RAPL1Q9NZN1 696 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 SPATA7Q9P0W8 599 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 RUVBL2Q9Y230 463 aaKnown RBP13.22□□□□□ -0.29
CXCL12-205ENST00000395794 KLHL20Q9Y2M5 609 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 NEU2Q9Y3R4 380 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 ZNF839A8K0R7 811 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 ZIC2O95409 532 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-205ENST00000395794 MATN4O95460 622 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 CBSLP0DN79 551 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 PIM1P11309 404 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-205ENST00000395794 CBSP35520 551 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 HSD17B2P37059 387 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 FOLR3P41439 243 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 GABRA4P48169 554 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 PGDP52209 483 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 RRADP55042 308 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 TLE1Q04724 770 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 CTBP1Q13363 440 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 GRM7Q14831 915 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 KLHL38Q2WGJ6 581 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 TCTE1Q5JU00 501 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 MED25Q71SY5 747 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 LMNTD1Q8N9Z9 388 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 TTC29Q8NA56 475 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-205ENST00000395794 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.21□□□□□ -0.29
CXCL12-205ENST00000395794 OR9A1PQ8NGU1 263 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 HMGCLL1Q8TB92 370 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 IP6K3Q96PC2 410 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 MIPEPQ99797 713 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 SELENOSQ9BQE4 189 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 TRIM56Q9BRZ2 755 aaKnown RBP13.21□□□□□ -0.29
CXCL12-205ENST00000395794 FAM167BQ9BTA0 163 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 SLC25A23Q9BV35 468 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 FBXO6Q9NRD1 293 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-205ENST00000395794 KLHL42Q9P2K6 505 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 DHCR7Q9UBM7 475 aaKnown RBP13.21□□□□□ -0.29
CXCL12-205ENST00000395794 COMMD10Q9Y6G5 202 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 FAM169AQ9Y6X4 670 aa13.21□□□□□ -0.29
CXCL12-205ENST00000395794 HELZ2Q9BYK8 2649 aaKnown RBP13.2□□□□□ -0.3
CXCL12-205ENST00000395794 ZCWPW2A0A1B0GU75 182 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 PEX12O00623 359 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 HCRTR1O43613 425 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 DNAJB5O75953 348 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 TTC4O95801 387 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 IGHEP01854 428 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 CAPN1P07384 714 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 PGAM1P18669 254 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 CMPK1P30085 196 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 OTX2P32243 289 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 RPA3P35244 121 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-205ENST00000395794 GRIA3P42263 894 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 PTGIRP43119 386 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 MAGEA3P43357 314 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 GNG11P61952 73 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 CHAF1BQ13112 559 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 TSTA3Q13630 321 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-205ENST00000395794 PTK6Q13882 451 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 SSPNQ14714 243 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 CYP2A13Q16696 494 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 CCSMST1Q4G0I0 132 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 NKAIN1Q4KMZ8 207 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 ACSBG2Q5FVE4 666 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 RNASEH2BQ5TBB1 312 aaKnown RBP13.2□□□□□ -0.3
CXCL12-205ENST00000395794 YOD1Q5VVQ6 348 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-205ENST00000395794 CPZQ66K79 652 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 TTLL10Q6ZVT0 673 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 NEK10Q6ZWH5 1172 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 DENND6AQ8IWF6 608 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 TMEM102Q8N9M5 508 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-205ENST00000395794 KCNJ9Q92806 393 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 INPP5DQ92835 1189 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 SIGLEC10Q96LC7 697 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 RUNDC3BQ96NL0 473 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 GBP5Q96PP8 586 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 NAT9Q9BTE0 207 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 TRIM55Q9BYV6 548 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 DDX47Q9H0S4 455 aaKnown RBP13.2□□□□□ -0.3
CXCL12-205ENST00000395794 KCNF1Q9H3M0 494 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 UTP6Q9NYH9 597 aaKnown RBP13.2□□□□□ -0.3
CXCL12-205ENST00000395794 FBXO5Q9UKT4 447 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 PTRH2Q9Y3E5 179 aaKnown RBP13.2□□□□□ -0.3
CXCL12-205ENST00000395794 PIKFYVEQ9Y2I7 2098 aa13.2□□□□□ -0.3
CXCL12-205ENST00000395794 H3BMH7 237 aa13.19□□□□□ -0.3
CXCL12-205ENST00000395794 DNALI1O14645 258 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms