RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 NXT1Q9UKK6 140 aaKnown RBP20.24■□□□□ 0.83
TRAF4-203ENST00000394925 PCDHA13Q9Y5I0 950 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 CCDC162PA2VCL2 907 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 MROH6A6NGR9 719 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 TJP3O95049 919 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 STSP08842 583 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 POU3F2P20265 443 aaPredicted RBP20.23■□□□□ 0.83
TRAF4-203ENST00000394925 CD9P21926 228 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 GRM7Q14831 915 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 CCDC38Q502W7 563 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 ZC3H12BQ5HYM0 836 aaKnown RBP20.23■□□□□ 0.83
TRAF4-203ENST00000394925 FCRL6Q6DN72 434 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 FIGLAQ6QHK4 219 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 VRK3Q8IV63 474 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 SLC22A18Q96BI1 424 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 VPS50Q96JG6 964 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 SLX1AQ9BQ83 275 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 MESP1Q9BRJ9 268 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 MENTQ9BUN1 341 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 LUC7LQ9NQ29 371 aaKnown RBP20.23■□□□□ 0.83
TRAF4-203ENST00000394925 SEMA3GQ9NS98 782 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 INTS7Q9NVH2 962 aaKnown RBP20.23■□□□□ 0.83
TRAF4-203ENST00000394925 MAU2Q9Y6X3 613 aa20.23■□□□□ 0.83
TRAF4-203ENST00000394925 A0A1B0GUH1 482 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 KLHL18O94889 574 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 CCR7P32248 378 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 HSPA14Q0VDF9 509 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 SF1Q15637 639 aaKnown RBP20.22■□□□□ 0.83
TRAF4-203ENST00000394925 TCTE1Q5JU00 501 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 YOD1Q5VVQ6 348 aaPredicted RBP20.22■□□□□ 0.83
TRAF4-203ENST00000394925 SLC22A15Q8IZD6 547 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 DTWD1Q8N5C7 304 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 TAB3Q8N5C8 712 aaPredicted RBP20.22■□□□□ 0.83
TRAF4-203ENST00000394925 BCORP1Q8N888 145 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 FAM71DQ8N9W8 422 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 TTC29Q8NA56 475 aaPredicted RBP20.22■□□□□ 0.83
TRAF4-203ENST00000394925 OR1N1Q8NGS0 311 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 SELENOSQ9BQE4 189 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 CRB3Q9BUF7 120 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 OLAHQ9NV23 265 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 COPG2Q9UBF2 871 aa20.22■□□□□ 0.83
TRAF4-203ENST00000394925 JRKO75564 520 aa20.21■□□□□ 0.83
TRAF4-203ENST00000394925 S1PR4O95977 384 aa20.21■□□□□ 0.83
TRAF4-203ENST00000394925 PSMA3P25788 255 aa20.21■□□□□ 0.83
TRAF4-203ENST00000394925 CETN2P41208 172 aa20.21■□□□□ 0.83
TRAF4-203ENST00000394925 RWDD2BP57060 319 aa20.21■□□□□ 0.83
TRAF4-203ENST00000394925 TBX2Q13207 712 aaPredicted RBP20.21■□□□□ 0.83
TRAF4-203ENST00000394925 MFAP5Q13361 173 aa20.21■□□□□ 0.83
TRAF4-203ENST00000394925 MCEMP1Q8IX19 187 aa20.21■□□□□ 0.83
TRAF4-203ENST00000394925 PRSS58Q8IYP2 241 aa20.21■□□□□ 0.83
TRAF4-203ENST00000394925 MAGEB10Q96LZ2 347 aaPredicted RBP20.21■□□□□ 0.83
TRAF4-203ENST00000394925 LMF1Q96S06 567 aa20.21■□□□□ 0.83
TRAF4-203ENST00000394925 ZNF160Q9HCG1 818 aa20.21■□□□□ 0.83
TRAF4-203ENST00000394925 VSTM2BA6NLU5 285 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 F8W8V4 182 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 ZNF189O75820 626 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-203ENST00000394925 RPN2P04844 631 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 VSX2P58304 361 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-203ENST00000394925 GRB7Q14451 532 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 SPA17Q15506 151 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 FAM214AQ32MH5 1076 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 RPUSD3Q6P087 351 aaKnown RBP20.2■□□□□ 0.82
TRAF4-203ENST00000394925 DCUN1D3Q8IWE4 304 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 OR2L8Q8NGY9 312 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 HDAC10Q969S8 669 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 ZNF285Q96NJ3 590 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 TTC1Q99614 292 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 IL1RAPL1Q9NZN1 696 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 SLC39A10Q9ULF5 831 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 FBN2P35556 2912 aa20.2■□□□□ 0.82
TRAF4-203ENST00000394925 PDZD2O15018 2839 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 FITM1A5D6W6 292 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 PSMD3O43242 534 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 GOT2P00505 430 aaKnown RBP20.19■□□□□ 0.82
TRAF4-203ENST00000394925 HPP00738 406 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 ACPPP15309 386 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 CARSP49589 748 aaKnown RBP20.19■□□□□ 0.82
TRAF4-203ENST00000394925 NAP1L1P55209 391 aaKnown RBP20.19■□□□□ 0.82
TRAF4-203ENST00000394925 KCNK10P57789 538 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 ARG2P78540 354 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 KLC1Q07866 573 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 P3H1Q32P28 736 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 WASHC2DQ5SRD0 308 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 NLRP9Q7RTR0 991 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 OR52K1Q8NGK4 314 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 OR13J1Q8NGT2 312 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 LKAAEAR1Q8TD35 194 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 ASZ1Q8WWH4 475 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 ALG3Q92685 438 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 C8orf44Q96CB5 159 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 SLC2A6Q9UGQ3 507 aa20.19■□□□□ 0.82
TRAF4-203ENST00000394925 IQCF5A8MTL0 148 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 MAP2K7O14733 419 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 RASGRF2O14827 1237 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 CTSVO60911 334 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 GPC4O75487 556 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 MED26O95402 600 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 PTMAP06454 111 aaKnown RBP20.18■□□□□ 0.82
TRAF4-203ENST00000394925 GDF10P55107 478 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 OCA2Q04671 838 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms