RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 C1QBP02746 253 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 HLA-DQB2P05538 268 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 IGFBP5P24593 272 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 UQCRC1P31930 480 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 POU6F2P78424 691 aaPredicted RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 ARMC4Q5T2S8 1044 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 PXDC1Q5TGL8 231 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 SHQ1Q6PI26 577 aaKnown RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 DLEU7Q6UYE1 221 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 LRRTM3Q86VH5 581 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 OR4M1Q8NGD0 313 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 SH3KBP1Q96B97 665 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 RHBDF1Q96CC6 855 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 PSKH2Q96QS6 385 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 A0A0U1RQS6 177 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 SEC22BO75396 215 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 DIO3P55073 304 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 GDF6Q6KF10 455 aaPredicted RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 RAB44Q7Z6P3 723 aaPredicted RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 TMEM179BQ7Z7N9 219 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 GALNT7Q86SF2 657 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 TSPYL5Q86VY4 417 aaPredicted RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 ABI1Q8IZP0 508 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 RDH10Q8IZV5 341 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 FAM86B1Q8N7N1 296 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 ZNF419Q96HQ0 510 aaPredicted RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 TEX37Q96LM6 180 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 MRPL9Q9BYD2 267 aaKnown RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 FNIP2Q9P278 1114 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 CFL2Q9Y281 166 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 RWDD3Q9Y3V2 267 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 PTGDR2Q9Y5Y4 395 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 MYADML2A6NDP7 307 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 IFRD1O00458 451 aaPredicted RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 PDGFAP04085 211 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 PSKH1P11801 424 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 SOX11P35716 441 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 AFMIDQ63HM1 303 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 ENPP6Q6UWR7 440 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 SERINC5Q86VE9 423 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 SPATA2LQ8IUW3 424 aaPredicted RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 RTL3Q8N8U3 475 aaKnown RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 SOCS4Q8WXH5 440 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 AGO3Q9H9G7 860 aaKnown RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 MID1IP1Q9NPA3 183 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 C14orf119Q9NWQ9 140 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 SLC2A6Q9UGQ3 507 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 AGO1Q9UL18 857 aaKnown RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 NDRG4Q9ULP0 352 aaKnown RBP18.42■□□□□ 0.54
HOXC6-202ENST00000394331 SHROOM3Q8TF72 1996 aa18.42■□□□□ 0.54
HOXC6-202ENST00000394331 CELF2O95319 508 aaKnown RBP18.41■□□□□ 0.54
HOXC6-202ENST00000394331 CSTF2P33240 577 aaKnown RBP eCLIP18.41■□□□□ 0.54
HOXC6-202ENST00000394331 NRG1Q02297 640 aaPredicted RBP18.41■□□□□ 0.54
HOXC6-202ENST00000394331 TUSC3Q13454 348 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 ARMCX4Q5H9R4 360 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 ZFAND4Q86XD8 727 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 MRGPRX2Q96LB1 330 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 UROC1Q96N76 676 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 GTPBP2Q9BX10 602 aaKnown RBP18.41■□□□□ 0.54
HOXC6-202ENST00000394331 MEN1O00255 615 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 GLULP15104 373 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 CA5AP35218 305 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 ASAH1Q13510 395 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 SDE2Q6IQ49 451 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 SLC22A4Q9H015 551 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 PRDM8Q9NQV8 689 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 WDR70Q9NW82 654 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 NUFIP1Q9UHK0 495 aaKnown RBP18.41■□□□□ 0.54
HOXC6-202ENST00000394331 PKP3Q9Y446 797 aa18.41■□□□□ 0.54
HOXC6-202ENST00000394331 SCELO95171 688 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 IGHA2P01877 340 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 CYP2A6P11509 494 aaPredicted RBP18.4■□□□□ 0.54
HOXC6-202ENST00000394331 KRT20P35900 424 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 B2MP61769 119 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 MGAT3Q09327 533 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 TAF1CQ15572 869 aaPredicted RBP18.4■□□□□ 0.54
HOXC6-202ENST00000394331 GPR162Q16538 588 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 CXCL17Q6UXB2 119 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 CD300LGQ6UXG3 332 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 UBE2Q1Q7Z7E8 422 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 CHPFQ8IZ52 775 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 ZNF583Q96ND8 569 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 TMEM209Q96SK2 561 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 ACOX2Q99424 681 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 NUSAP1Q9BXS6 441 aaKnown RBP18.4■□□□□ 0.54
HOXC6-202ENST00000394331 UCK2Q9BZX2 261 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 TMPRSS11EQ9UL52 423 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 GMPPBQ9Y5P6 360 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 E9PAM4 449 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 RETP07949 1114 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 TSPAN8P19075 237 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 ELP6Q0PNE2 266 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 SYT16Q17RD7 645 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 TIGD6Q17RP2 521 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 LRRC8DQ7L1W4 858 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 ISCA2Q86U28 154 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 RNF135Q8IUD6 432 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 OR8H2Q8N162 312 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 VWA5B2Q8N398 1253 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms