RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TBC1D15Q8TC07 691 aa14.45□□□□□ -0.1
CCDC50-201ENST00000392455 ACSS3Q9H6R3 686 aa14.45□□□□□ -0.1
CCDC50-201ENST00000392455 EQTNQ9NQ60 294 aa14.45□□□□□ -0.1
CCDC50-201ENST00000392455 ZNF99A8MXY4 864 aaPredicted RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 TMEM150CB9EJG8 249 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 TBX2Q13207 712 aaPredicted RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 KANSL1Q7Z3B3 1105 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 PACRGLQ8N7B6 248 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 GEMIN6Q8WXD5 167 aaKnown RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 CLDN5O00501 218 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 PEX14O75381 377 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 RBM23Q86U06 439 aaKnown RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 CADM2Q8N3J6 435 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 FAM86B1Q8N7N1 296 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 MFSD2AQ8NA29 543 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 MEPEQ9NQ76 525 aaPredicted RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 CAPN8A6NHC0 703 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 LRRC72A6NJI9 287 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 PIP5K1CO60331 668 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 LINC00032P0C843 101 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 LDLRAP1Q5SW96 308 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 PRPF38BQ5VTL8 546 aaKnown RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 FAM124AQ86V42 546 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 ANKRD52Q8NB46 1076 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 OR56B2PQ8NGI1 322 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 FCAMRQ8WWV6 532 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 PCDHB18PQ96TA0 734 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 DDX4Q9NQI0 724 aaKnown RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 TAS2R14Q9NYV8 317 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 VWA7Q9Y334 891 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 DGKBQ9Y6T7 804 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 MT-ND5P03915 603 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 GNSP15586 552 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 ITPKAP23677 461 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 CLCN4P51793 760 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 GPRC6AQ5T6X5 926 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 SPATA6LQ8N4H0 392 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 ZNF283Q8N7M2 679 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 GPR152Q8TDT2 470 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 XAGE5Q8WWM1 108 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 RCN3Q96D15 328 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 TBL1XR1Q9BZK7 514 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 ZNF226Q9NYT6 803 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 EVPLQ92817 2033 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 MEGF6O75095 1541 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 SLC19A2O60779 497 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 APODP05090 189 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 CCL23P55773 120 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 CDK18Q07002 472 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 SCGB2B2Q4G0G5 96 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 MYO19Q96H55 970 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 MAGEB17A8MXT2 336 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 TREHO43280 583 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 BANF1O75531 89 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 RBMXP38159 391 aaKnown RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 CDK3Q00526 305 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 SGCBQ16585 318 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 SCIMPQ6UWF3 145 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 USP50Q70EL3 339 aaPredicted RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 NAT16Q8N8M0 369 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 FCRL2Q96LA5 508 aaPredicted RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 TSNAXQ99598 290 aaKnown RBP14.44□□□□□ -0.1
CCDC50-201ENST00000392455 HIPK3Q9H422 1215 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 CXorf21Q9HAI6 301 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 TAS2R8Q9NYW2 309 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 PCDHGA11Q9Y5H2 935 aa14.44□□□□□ -0.1
CCDC50-201ENST00000392455 FXYD6-FXYD2A0A087WZ82 144 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 A0A1W2PQ45 241 aaPredicted RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 A0A1W2PQY0 241 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 OR6C70A6NIJ9 312 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 NOTOA8MTQ0 251 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 C1orf196B1AJZ1 125 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 HOXD8P13378 290 aaPredicted RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 ZNF662Q6ZS27 426 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 LRRN4Q8WUT4 740 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 FXYD6Q9H0Q3 95 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 SDHAF2Q9NX18 166 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 NME7Q9Y5B8 376 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 PIRTP0C851 137 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 HSD11B2P80365 405 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 CACNG1Q06432 222 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 UBAP2LQ14157 1087 aaKnown RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 PTGR1Q14914 329 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 VANGL1Q8TAA9 524 aaPredicted RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 ZNF431Q8TF32 576 aaPredicted RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 POLR2J2Q9GZM3 115 aaKnown RBP14.43□□□□□ -0.1
CCDC50-201ENST00000392455 FN3KQ9H479 309 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 TMEM9Q9P0T7 183 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 DEPDC5O75140 1603 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 DISP2A7MBM2 1401 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 FAM237BA0A1B0GVD1 139 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 PRNPP04156 253 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 GOT1P17174 413 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 CHAF1BQ13112 559 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 C2orf76Q3KRA6 126 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 SMARCD3Q6STE5 483 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 FAM151BQ6UXP7 276 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 SLC29A4Q7RTT9 530 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 PHC2Q8IXK0 858 aa14.43□□□□□ -0.1
CCDC50-201ENST00000392455 PROKR2Q8NFJ6 384 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms