RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 SPPL3Q8TCT6 385 aa16.1■□□□□ 0.17
SNX9-201ENST00000392185 LRIG1Q96JA1 1093 aa16.1■□□□□ 0.17
SNX9-201ENST00000392185 RC3H2Q9HBD1 1191 aaKnown RBP16.1■□□□□ 0.17
SNX9-201ENST00000392185 PAPPA2Q9BXP8 1791 aa16.1■□□□□ 0.17
SNX9-201ENST00000392185 LIN7AO14910 233 aaPredicted RBP16.09■□□□□ 0.17
SNX9-201ENST00000392185 SERPINB7O75635 380 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 CBSLP0DN79 551 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 VARSP26640 1264 aaKnown RBP16.09■□□□□ 0.17
SNX9-201ENST00000392185 CBSP35520 551 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 NUP107P57740 925 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 ZBTB46Q86UZ6 589 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 OR5AK3PQ8NH89 298 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 SMPDL3AQ92484 453 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 ABCG4Q9H172 646 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 CTPS2Q9NRF8 586 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 USE1Q9NZ43 259 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 MAFFQ9ULX9 164 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 GTF2A1LQ9UNN4 478 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 LYVE1Q9Y5Y7 322 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 G3V2L1 256 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 OAS1P00973 400 aaKnown RBP16.09■□□□□ 0.17
SNX9-201ENST00000392185 SLC7A9P82251 487 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 ZNF542PQ5EBM4 170 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 TMIGD1Q6UXZ0 262 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 RHEBL1Q8TAI7 183 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 NSMCE3Q96MG7 304 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 RSPH9Q9H1X1 276 aaPredicted RBP16.09■□□□□ 0.17
SNX9-201ENST00000392185 NDUFA13Q9P0J0 144 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 MRPS33Q9Y291 106 aaKnown RBP16.09■□□□□ 0.17
SNX9-201ENST00000392185 SLC9A8Q9Y2E8 581 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 OR1A2Q9Y585 309 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 FADS3Q9Y5Q0 445 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 LOC285095A0A1B0GVY8 99 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 TRIM43BA6NCK2 446 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 H7BY64 318 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 ERI3O43414 337 aaKnown RBP16.09■□□□□ 0.17
SNX9-201ENST00000392185 CCNDBP1O95273 360 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 DNAJB1P25685 340 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 S100A5P33763 92 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 SOX9P48436 509 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 RPS13P62277 151 aaKnown RBP16.09■□□□□ 0.17
SNX9-201ENST00000392185 SRSF11Q05519 484 aaKnown RBP16.09■□□□□ 0.17
SNX9-201ENST00000392185 ADRM1Q16186 407 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 DEPDC1Q5TB30 811 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
SNX9-201ENST00000392185 PRAP1Q96NZ9 151 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 CGREF1Q99674 301 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 POPDC3Q9HBV1 291 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 STON1Q9Y6Q2 735 aa16.09■□□□□ 0.17
SNX9-201ENST00000392185 A0A087WXM4 84 aa16.08■□□□□ 0.17
SNX9-201ENST00000392185 SLC6A11P48066 632 aa16.08■□□□□ 0.17
SNX9-201ENST00000392185 CLCN4P51793 760 aa16.08■□□□□ 0.17
SNX9-201ENST00000392185 SH3BP2P78314 561 aa16.08■□□□□ 0.17
SNX9-201ENST00000392185 ANKRD26P1Q6NSI1 321 aa16.08■□□□□ 0.17
SNX9-201ENST00000392185 VN1R5Q7Z5H4 357 aa16.08■□□□□ 0.17
SNX9-201ENST00000392185 WFDC5Q8TCV5 224 aa16.08■□□□□ 0.17
SNX9-201ENST00000392185 JPH3Q8WXH2 748 aaPredicted RBP16.08■□□□□ 0.17
SNX9-201ENST00000392185 RORBQ92753 470 aa16.08■□□□□ 0.17
SNX9-201ENST00000392185 NKX1-2Q9UD57 310 aaPredicted RBP16.08■□□□□ 0.17
SNX9-201ENST00000392185 ASCC3Q8N3C0 2202 aaKnown RBP16.08■□□□□ 0.17
SNX9-201ENST00000392185 LINC01553A4QN01 128 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 KMOO15229 486 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 ABLIM3O94929 683 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 EBLN1P0CF75 366 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 TYRP1P17643 537 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 CD72P21854 359 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 CCR8P51685 355 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 PARP8Q8N3A8 854 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 OR9A1PQ8NGU1 263 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 WBP2Q969T9 261 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 CHID1Q9BWS9 393 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 ZBP1Q9H171 429 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 ARNT2Q9HBZ2 717 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 ZNF229Q9UJW7 825 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 CDV3Q9UKY7 258 aaKnown RBP16.08■□□□□ 0.16
SNX9-201ENST00000392185 CDH7Q9ULB5 785 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 SAMD4AQ9UPU9 718 aaKnown RBP16.08■□□□□ 0.16
SNX9-201ENST00000392185 PIAS3Q9Y6X2 628 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 RHPN2P1A8MT19 583 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 PRPS1L1P21108 318 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 TCEAL5Q5H9L2 206 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 ZNF605Q86T29 641 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 TRAM1L1Q8N609 369 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 KCT2Q8NC54 265 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 TSPAN14Q8NG11 270 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 HM13Q8TCT9 377 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 FUBP1Q96AE4 644 aaKnown RBP16.08■□□□□ 0.16
SNX9-201ENST00000392185 ZNF607Q96SK3 696 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 CEP44Q9C0F1 390 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 TREX1Q9NSU2 369 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 G3V2T6 193 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 PPP6CO00743 305 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 PGRP06401 933 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 CDH1P12830 882 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 DYNC1I2Q13409 638 aaKnown RBP16.08■□□□□ 0.16
SNX9-201ENST00000392185 C1orf61Q13536 156 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 CST6Q15828 149 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 EIF3MQ7L2H7 374 aaKnown RBP16.08■□□□□ 0.16
SNX9-201ENST00000392185 ADCY4Q8NFM4 1077 aa16.08■□□□□ 0.16
SNX9-201ENST00000392185 BTN2A2Q8WVV5 523 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms