RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 VPS9D1Q9Y2B5 631 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 PTRH2Q9Y3E5 179 aaKnown RBP12.49□□□□□ -0.41
RPAIN-202ENST00000381208 SPTAN1Q13813 2472 aaKnown RBP12.49□□□□□ -0.41
RPAIN-202ENST00000381208 A0A1B0GX78 115 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 ZNF185O15231 689 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 SRPX2O60687 465 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-202ENST00000381208 ONECUT2O95948 504 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 GP1BBP13224 206 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 ETS1P14921 441 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 PAMP19021 973 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 TPSB2P20231 275 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 MAGP20916 626 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 ATP5DP30049 168 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 PEBP1P30086 187 aaKnown RBP12.48□□□□□ -0.41
RPAIN-202ENST00000381208 ADARP55265 1226 aaKnown RBP12.48□□□□□ -0.41
RPAIN-202ENST00000381208 SRSF1Q07955 248 aaKnown RBP eCLIP12.48□□□□□ -0.41
RPAIN-202ENST00000381208 SEMA3AQ14563 771 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 GRM7Q14831 915 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 SIX1Q15475 284 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-202ENST00000381208 SF1Q15637 639 aaKnown RBP12.48□□□□□ -0.41
RPAIN-202ENST00000381208 TPSAB1Q15661 275 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 CYP2A13Q16696 494 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 FAM214AQ32MH5 1076 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 C1orf189Q5VU69 101 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 JMJD6Q6NYC1 403 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-202ENST00000381208 MRPL14Q6P1L8 145 aaKnown RBP12.48□□□□□ -0.41
RPAIN-202ENST00000381208 LRRC8BQ6P9F7 803 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 VRK3Q8IV63 474 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 TTC29Q8NA56 475 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-202ENST00000381208 LINC01555Q8NAE3 123 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 CFAP61Q8NHU2 1237 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 HMGCLL1Q8TB92 370 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 MENTQ9BUN1 341 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 KIFC1Q9BW19 673 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 P2RY12Q9H244 342 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 DHCR7Q9UBM7 475 aaKnown RBP12.48□□□□□ -0.41
RPAIN-202ENST00000381208 MAP4K5Q9Y4K4 846 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 FAM169AQ9Y6X4 670 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 RELNP78509 3460 aa12.48□□□□□ -0.41
RPAIN-202ENST00000381208 USP9YO00507 2555 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-202ENST00000381208 FGGP02679 453 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 ITGAXP20702 1163 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 ALAS2P22557 587 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 SOX8P57073 446 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 MYBPC3Q14896 1274 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 NADK2Q4G0N4 442 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 DCAF10Q5QP82 559 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 FHL5Q5TD97 284 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 FIGLAQ6QHK4 219 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 MICALCLQ6ZW33 695 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 OTUD6BQ8N6M0 293 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 LMNTD1Q8N9Z9 388 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 SKA2Q8WVK7 121 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-202ENST00000381208 NUDT9Q9BW91 350 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 WDR54Q9H977 334 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 ATP13A2Q9NQ11 1180 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 SPATA7Q9P0W8 599 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 TTC7AQ9ULT0 858 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-202ENST00000381208 KLK4Q9Y5K2 254 aa12.47□□□□□ -0.41
RPAIN-202ENST00000381208 COL12A1Q99715 3063 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-202ENST00000381208 MAGEB16A2A368 324 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 A6NL46 340 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 IQCF5A8MTL0 148 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 DSCR3O14972 297 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 HCRTR1O43613 425 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 PHF2O75151 1096 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 C1orf105O95561 183 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 ESR1P03372 595 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 ZSCAN5DPP0CG00 497 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 OGNP20774 298 aaKnown RBP12.46□□□□□ -0.41
RPAIN-202ENST00000381208 HSD17B2P37059 387 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 GCGRP47871 477 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 GRB7Q14451 532 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 ESPL1Q14674 2120 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 INPP5JQ15735 1006 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-202ENST00000381208 TYSND1Q2T9J0 566 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 SLC6A19Q695T7 634 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 KIAA0930Q6ICG6 404 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-202ENST00000381208 IGFL3Q6UXB1 125 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 OVCH1Q7RTY7 1134 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 PRUNE1Q86TP1 453 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 LDB1Q86U70 411 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-202ENST00000381208 KRT222Q8N1A0 295 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 GALNT16Q8N428 558 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 LKAAEAR1Q8TD35 194 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 COG1Q8WTW3 980 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 ZNF285Q96NJ3 590 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 SELENOSQ9BQE4 189 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 SLC26A1Q9H2B4 701 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 CUTCQ9NTM9 273 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 P4HTMQ9NXG6 502 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 UTP6Q9NYH9 597 aaKnown RBP12.46□□□□□ -0.41
RPAIN-202ENST00000381208 MARCH4Q9P2E8 410 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-202ENST00000381208 SOX13Q9UN79 622 aa12.46□□□□□ -0.41
RPAIN-202ENST00000381208 USP9XQ93008 2570 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-202ENST00000381208 FITM1A5D6W6 292 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 ZNF839A8K0R7 811 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 AGPSO00116 658 aa12.45□□□□□ -0.42
RPAIN-202ENST00000381208 PRICKLE3O43900 615 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms