RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 TRIM8Q9BZR9 551 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 FARSBQ9NSD9 589 aaKnown RBP13.91□□□□□ -0.18
CLCN4-201ENST00000380829 ERGIC3Q9Y282 383 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 SLC27A6Q9Y2P4 619 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 TMEM202A6NGA9 273 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 PLK4O00444 970 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 SOCS2O14508 198 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 STK16O75716 305 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 CLIC3O95833 236 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 C8BP07358 591 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 GRIA3P42263 894 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 ZFP36L2P47974 494 aaKnown RBP13.9□□□□□ -0.18
CLCN4-201ENST00000380829 PSMD8P48556 350 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 TRIM25Q14258 630 aaKnown RBP13.9□□□□□ -0.18
CLCN4-201ENST00000380829 KCNJ8Q15842 424 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 DUSP6Q16828 381 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 ZXDCQ2QGD7 858 aaPredicted RBP13.9□□□□□ -0.18
CLCN4-201ENST00000380829 TRIM16LQ309B1 348 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 SGO1Q5FBB7 561 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 LIPIQ6XZB0 460 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 HACD2Q6Y1H2 254 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 TRAM1L1Q8N609 369 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 UBTD2Q8WUN7 234 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 ROPN1LQ96C74 230 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 CLIP3Q96DZ5 547 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 ANKRD60Q9BZ19 345 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 BRINP2Q9C0B6 783 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 IGFLR1Q9H665 355 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 SLC52A3Q9NQ40 469 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 TMEM181Q9P2C4 612 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 KLHL42Q9P2K6 505 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 DEC1Q9P2X7 70 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 DKK3Q9UBP4 350 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 KLQ9UEF7 1012 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 CNOT11Q9UKZ1 510 aaKnown RBP13.9□□□□□ -0.18
CLCN4-201ENST00000380829 A0A087WXM4 84 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 LOC730098B7Z3J9 87 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 INPP4BO15327 924 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 SLC22A3O75751 556 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 NFATC1O95644 943 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 EPB42P16452 691 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 JAK1P23458 1154 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 FSHRP23945 695 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 IL12AP29459 219 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 MLLT10P55197 1068 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 KCNK10P57789 538 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 GBX1Q14549 363 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 SF3B4Q15427 424 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLCN4-201ENST00000380829 ZNF284Q2VY69 593 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 HMBOX1Q6NT76 420 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 TTC33Q6PID6 262 aaPredicted RBP13.9□□□□□ -0.18
CLCN4-201ENST00000380829 CHST15Q7LFX5 561 aaPredicted RBP13.9□□□□□ -0.18
CLCN4-201ENST00000380829 TECPR1Q7Z6L1 1165 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 IGFN1Q86VF2 1251 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 NUDT8Q8WV74 236 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 PYCR2Q96C36 320 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 LRIG1Q96JA1 1093 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 ZSCAN5AQ9BUG6 496 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 SFXN1Q9H9B4 322 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 SUCOQ9UBS9 1254 aaKnown RBP13.9□□□□□ -0.18
CLCN4-201ENST00000380829 CD300AQ9UGN4 299 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 DAPK2Q9UIK4 370 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 AP4S1Q9Y587 144 aa13.9□□□□□ -0.18
CLCN4-201ENST00000380829 ATG2AQ2TAZ0 1938 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 ASPDHA6ND91 283 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 A6NL46 340 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 FXYD1O00168 92 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 NUAK1O60285 661 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 HOXD11P31277 338 aaPredicted RBP13.89□□□□□ -0.19
CLCN4-201ENST00000380829 CASP2P42575 452 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 RCAN2Q14206 197 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 AP5B1Q2VPB7 878 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 TIGD2Q4W5G0 525 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 RFTN2Q52LD8 501 aaPredicted RBP13.89□□□□□ -0.19
CLCN4-201ENST00000380829 ERAP2Q6P179 960 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 CYP2R1Q6VVX0 501 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 SNX29P2Q8IUI4 249 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 ASB11Q8WXH4 323 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 AP2M1Q96CW1 435 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 SLC12A9Q9BXP2 914 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 PARVBQ9HBI1 364 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 BCAP29Q9UHQ4 241 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 POU2F3Q9UKI9 436 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 TMA7Q9Y2S6 64 aaKnown RBP13.89□□□□□ -0.19
CLCN4-201ENST00000380829 PLXNA2O75051 1894 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 NME4O00746 187 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 G6PDP11413 515 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 NR4A1P22736 598 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 S100A1P23297 94 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 CTSCP53634 463 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 HMGCS1Q01581 520 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 NEDD8Q15843 81 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 MOGQ16653 247 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 AAK1Q2M2I8 961 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 SAMD4BQ5PRF9 694 aaKnown RBP13.89□□□□□ -0.19
CLCN4-201ENST00000380829 PERM1Q5SV97 790 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 C9orf64Q5T6V5 341 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 CADM3Q8N126 398 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 PROKR1Q8TCW9 393 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 BTN2A2Q8WVV5 523 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms