RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SF1Q15637 639 aaKnown RBP16.18■□□□□ 0.18
SMN2-201ENST00000380741 CYP2A13Q16696 494 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 IGFL3Q6UXB1 125 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 GAS2L3Q86XJ1 694 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 IQCKQ8N0W5 287 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 SPC24Q8NBT2 197 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 ZBTB20Q9HC78 741 aaPredicted RBP16.18■□□□□ 0.18
SMN2-201ENST00000380741 INTS7Q9NVH2 962 aaKnown RBP16.18■□□□□ 0.18
SMN2-201ENST00000380741 CUEDC1Q9NWM3 386 aaPredicted RBP16.18■□□□□ 0.18
SMN2-201ENST00000380741 SLC39A10Q9ULF5 831 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 DOPEY1Q5JWR5 2465 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 AGPSO00116 658 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 RPL22P35268 128 aaKnown RBP16.17■□□□□ 0.18
SMN2-201ENST00000380741 SOX8P57073 446 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 CRADDP78560 199 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 PCID2Q5JVF3 399 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 PTRHD1Q6GMV3 140 aaKnown RBP16.17■□□□□ 0.18
SMN2-201ENST00000380741 FIGLAQ6QHK4 219 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 CISD2Q8N5K1 135 aaKnown RBP16.17■□□□□ 0.18
SMN2-201ENST00000380741 PRR7Q8TB68 274 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 INPP5DQ92835 1189 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 FKBP10Q96AY3 582 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 SPSB2Q99619 263 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 P2RY12Q9H244 342 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 WDR54Q9H977 334 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 ATP13A2Q9NQ11 1180 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 TREX1Q9NSU2 369 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 CUTCQ9NTM9 273 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 ASF1BQ9NVP2 202 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 GUCA1BQ9UMX6 200 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 NFS1Q9Y697 457 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 CNTRLQ7Z7A1 2325 aa16.17■□□□□ 0.18
SMN2-201ENST00000380741 KRT87PA6NCN2 255 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 DSCR3O14972 297 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 PRICKLE3O43900 615 aaPredicted RBP16.16■□□□□ 0.18
SMN2-201ENST00000380741 KLHL41O60662 606 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 ALOX12BO75342 701 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 IPO13O94829 963 aaKnown RBP16.16■□□□□ 0.18
SMN2-201ENST00000380741 ONECUT2O95948 504 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 MMP11P24347 488 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 BDKRB1P46663 353 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 AIMP2Q13155 320 aaKnown RBP16.16■□□□□ 0.18
SMN2-201ENST00000380741 GRM7Q14831 915 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 NR6A1Q15406 480 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 SIX1Q15475 284 aaPredicted RBP16.16■□□□□ 0.18
SMN2-201ENST00000380741 NKG7Q16617 165 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 CCSMST1Q4G0I0 132 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 ZC3H12BQ5HYM0 836 aaKnown RBP16.16■□□□□ 0.18
SMN2-201ENST00000380741 TCTE1Q5JU00 501 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 COX15Q7KZN9 410 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 OVCH1Q7RTY7 1134 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 GSDMBQ8TAX9 411 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 DENND1AQ8TEH3 1009 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.16■□□□□ 0.18
SMN2-201ENST00000380741 TM9SF4Q92544 642 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 RAD51AP1Q96B01 352 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 ZNF285Q96NJ3 590 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 PANX3Q96QZ0 392 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 SELENOSQ9BQE4 189 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 RAB11FIP5Q9BXF6 653 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 TSGA10Q9BZW7 698 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 ILKAPQ9H0C8 392 aaPredicted RBP16.16■□□□□ 0.18
SMN2-201ENST00000380741 SLC6A20Q9NP91 592 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 EIF2B3Q9NR50 452 aaKnown RBP16.16■□□□□ 0.18
SMN2-201ENST00000380741 GNPTGQ9UJJ9 305 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 CDC23Q9UJX2 597 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 FBXL4Q9UKA2 621 aa16.16■□□□□ 0.18
SMN2-201ENST00000380741 TTC7AQ9ULT0 858 aaPredicted RBP16.16■□□□□ 0.18
SMN2-201ENST00000380741 RUVBL2Q9Y230 463 aaKnown RBP16.16■□□□□ 0.18
SMN2-201ENST00000380741 CENPEQ02224 2701 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 A1L4Q6 167 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 SOCS6O14544 535 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 CTSVO60911 334 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 C1orf105O95561 183 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 ALBP02768 609 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 RPS3P23396 243 aaKnown RBP eCLIP16.15■□□□□ 0.18
SMN2-201ENST00000380741 ITGA3P26006 1051 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 PSMB5P28074 263 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 NMBRP28336 390 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 OR1D4P47884 311 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 YOD1Q5VVQ6 348 aaPredicted RBP16.15■□□□□ 0.18
SMN2-201ENST00000380741 TTC23LQ6PF05 361 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 Q6ZS92 163 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 SHISA6Q6ZSJ9 500 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 OTOAQ7RTW8 1153 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 MPP5Q8N3R9 675 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 ZADH2Q8N4Q0 377 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 DTWD1Q8N5C7 304 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 METTL27Q8N6F8 245 aaPredicted RBP16.15■□□□□ 0.18
SMN2-201ENST00000380741 TTC29Q8NA56 475 aaPredicted RBP16.15■□□□□ 0.18
SMN2-201ENST00000380741 SKA2Q8WVK7 121 aaPredicted RBP16.15■□□□□ 0.18
SMN2-201ENST00000380741 NACC2Q96BF6 587 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 IL22Q9GZX6 179 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 SLC26A1Q9H2B4 701 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 ENAMQ9NRM1 1142 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 CTSFQ9UBX1 484 aa16.15■□□□□ 0.18
SMN2-201ENST00000380741 TARM1B6A8C7 271 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 NRP2O60462 931 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 NDUFS3O75489 264 aa16.14■□□□□ 0.17
SMN2-201ENST00000380741 FKBP9O95302 570 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms