RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 C14orf28Q4W4Y0 310 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 ARL13AQ5H913 290 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 ATG16L1Q676U5 607 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 THOC6Q86W42 341 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 LRRC56Q8IYG6 542 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 LSMEM2Q8N112 164 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 EID2Q8N6I1 236 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 SNX31Q8N9S9 440 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 GPR156Q8NFN8 814 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 TRPC4APQ8TEL6 797 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 ZNF483Q8TF39 744 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 TBC1D10AQ9BXI6 508 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 ZBTB26Q9HCK0 441 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 RXFP3Q9NSD7 469 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 LAMA1P25391 3075 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 A0A1B0GTL3 188 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 K7EPI3 171 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 UBFD1O14562 309 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 YKT6O15498 198 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 ZNF806P0C7X5 589 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 GRK2P25098 689 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 LSP1P33241 339 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 RAB28P51157 221 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 SEC24CP53992 1094 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 ABCE1P61221 599 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 TBPL1P62380 186 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 CLCQ05315 142 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 GTF2H2Q13888 395 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 RCN2Q14257 317 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 RBBP7Q16576 425 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 GTF2H2CQ6P1K8 395 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 TMEM26Q6ZUK4 368 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 FRMD7Q6ZUT3 714 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 GOLGA7Q7Z5G4 137 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 C17orf82Q86X59 251 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 OR56A3Q8NH54 315 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 AGR3Q8TD06 166 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 SH3KBP1Q96B97 665 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 OR4K3Q96R72 315 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 ACAT2Q9BWD1 397 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 SRMSQ9H3Y6 488 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 SLC32A1Q9H598 525 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 NOL11Q9H8H0 719 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 PARD6AQ9NPB6 346 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 SEMA4GQ9NTN9 838 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 NLGN3Q9NZ94 848 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 ANGPTL3Q9Y5C1 460 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 OR6C74A6NCV1 312 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 SIGLEC6O43699 453 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 H2AFYO75367 372 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 HSPA4LO95757 839 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 VIMP08670 466 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 ERGP11308 486 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 EPORP19235 508 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 PSMB5P28074 263 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 YBX1P67809 324 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 ARHGAP19Q14CB8 494 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 THEMIS2Q5TEJ8 643 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 AMIGO1Q86WK6 493 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 FAM20CQ8IXL6 584 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 RAB42Q8N4Z0 105 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 ARL10Q8N8L6 244 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 DCBLD1Q8N8Z6 715 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 OR2L8Q8NGY9 312 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 OR4C6Q8NH72 309 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 OR10G6Q8NH81 332 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 CNDP1Q96KN2 507 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 SGPP1Q9BX95 441 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 C1QTNF3Q9BXJ4 246 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 DRC3Q9H069 523 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 RABEP2Q9H5N1 569 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 CCDC134Q9H6E4 229 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 IPPKQ9H8X2 491 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 TNFRSF12AQ9NP84 129 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 CCDC177Q9NQR7 707 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 DNAJC11Q9NVH1 559 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 SPHK1Q9NYA1 384 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 SPATA7Q9P0W8 599 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 SH2B3Q9UQQ2 575 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 BTBD3Q9Y2F9 522 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 RNF215Q9Y6U7 377 aa13.65□□□□□ -0.22
HERPUD1-203ENST00000379792 A0A1W2PPV9 198 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 TMEM114B3SHH9 223 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 BTN3A3O00478 584 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 KLF11O14901 512 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 NPHS1O60500 1241 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 SNNO75324 88 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 KATNA1O75449 491 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 ALPPL2P10696 532 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 TYRP1P17643 537 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 PRDX3P30048 256 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 SHMT2P34897 504 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 HSD17B2P37059 387 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 ARL1P40616 181 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 CBX1P83916 185 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 SF3A3Q12874 501 aaKnown RBP eCLIP13.64□□□□□ -0.231e-8■■□□□ 12.2
HERPUD1-203ENST00000379792 CAPN13Q6MZZ7 669 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 PRR23CQ6ZRP0 262 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 RGS9BPQ6ZS82 235 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms