RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 KIAA1191Q96A73 305 aa11.53□□□□□ -0.56
PCNA-201ENST00000379143 IL17FQ96PD4 163 aa11.53□□□□□ -0.56
PCNA-201ENST00000379143 PKP4Q99569 1192 aa11.53□□□□□ -0.56
PCNA-201ENST00000379143 ROPN1BQ9BZX4 212 aaPredicted RBP11.53□□□□□ -0.56
PCNA-201ENST00000379143 NRSN2Q9GZP1 204 aa11.53□□□□□ -0.56
PCNA-201ENST00000379143 ZNF768Q9H5H4 540 aaKnown RBP11.53□□□□□ -0.56
PCNA-201ENST00000379143 ROPN1Q9HAT0 212 aaPredicted RBP11.53□□□□□ -0.56
PCNA-201ENST00000379143 ARL15Q9NXU5 204 aa11.53□□□□□ -0.56
PCNA-201ENST00000379143 KLHL3Q9UH77 587 aa11.53□□□□□ -0.56
PCNA-201ENST00000379143 KLK13Q9UKR3 277 aa11.53□□□□□ -0.56
PCNA-201ENST00000379143 OARD1Q9Y530 152 aa11.53□□□□□ -0.56
PCNA-201ENST00000379143 UNC13CQ8NB66 2214 aa11.52□□□□□ -0.56
PCNA-201ENST00000379143 NPEPPSL1A6NEC2 478 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 A8MU76 341 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 CDC7O00311 574 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 ZBTB11O95625 1053 aaPredicted RBP11.52□□□□□ -0.57
PCNA-201ENST00000379143 TOP3BO95985 862 aaKnown RBP11.52□□□□□ -0.57
PCNA-201ENST00000379143 ANXA5P08758 320 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 OAS2P29728 719 aaKnown RBP11.52□□□□□ -0.57
PCNA-201ENST00000379143 MLLT3P42568 568 aaPredicted RBP11.52□□□□□ -0.57
PCNA-201ENST00000379143 ARL4DP49703 201 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 HNMTP50135 292 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 KPNA2P52292 529 aaKnown RBP11.52□□□□□ -0.57
PCNA-201ENST00000379143 NAA25Q14CX7 972 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 ACAP2Q15057 778 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 TSNQ15631 228 aaKnown RBP11.52□□□□□ -0.57
PCNA-201ENST00000379143 PHKG1Q16816 387 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 PPP1R3AQ16821 1122 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 TSNAXIP1Q2TAA8 658 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 LCA5Q86VQ0 697 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 SPNS2Q8IVW8 549 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 SYTL1Q8IYJ3 562 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 LSMEM2Q8N112 164 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 FBXO39Q8N4B4 442 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 RCBTB1Q8NDN9 531 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 RHEBL1Q8TAI7 183 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 STAG3L4Q8TBR4 150 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 ACMSDQ8TDX5 336 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 ZNF480Q8WV37 535 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 HNRNPLLQ8WVV9 542 aaKnown RBP11.52□□□□□ -0.57
PCNA-201ENST00000379143 KLHL6Q8WZ60 621 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 TSNARE1Q96NA8 513 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 OR2A14Q96R47 310 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 MAP3K3Q99759 626 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.57
PCNA-201ENST00000379143 PITPNM3Q9BZ71 974 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 VPS11Q9H270 941 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 INTS7Q9NVH2 962 aaKnown RBP11.52□□□□□ -0.57
PCNA-201ENST00000379143 SPHK1Q9NYA1 384 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 CIDEBQ9UHD4 219 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 PCDHB11Q9Y5F2 797 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 PCDHGA8Q9Y5G5 932 aa11.52□□□□□ -0.57
PCNA-201ENST00000379143 LAMA5O15230 3695 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 A0A0J9YY10 115 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 E7ENX8 843 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 PLD2O14939 933 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 CTIFO43310 598 aaKnown RBP11.51□□□□□ -0.57
PCNA-201ENST00000379143 KIF1CO43896 1103 aaKnown RBP11.51□□□□□ -0.57
PCNA-201ENST00000379143 PRICKLE3O43900 615 aaPredicted RBP11.51□□□□□ -0.57
PCNA-201ENST00000379143 KLHL2O95198 593 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 CCNDBP1O95273 360 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 JMJD7P0C870 316 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 UGT2B7P16662 529 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 IMPA1P29218 277 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 RPA3P35244 121 aaPredicted RBP11.51□□□□□ -0.57
PCNA-201ENST00000379143 PPP1CAP62136 330 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 HSD11B2P80365 405 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 TAP2Q03519 686 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 CAMK2BQ13554 666 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 C16orf72Q14CZ0 275 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 TGFBIQ15582 683 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 SF1Q15637 639 aaKnown RBP11.51□□□□□ -0.57
PCNA-201ENST00000379143 C3orf38Q5JPI3 329 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 CDKL4Q5MAI5 379 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 AGTRAPQ6RW13 159 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 GPSM1Q86YR5 675 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 CENPLQ8N0S6 344 aaPredicted RBP11.51□□□□□ -0.57
PCNA-201ENST00000379143 TCAIMQ8N3R3 496 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 SPATA6LQ8N4H0 392 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 KDF1Q8NAX2 398 aaPredicted RBP11.51□□□□□ -0.57
PCNA-201ENST00000379143 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 FBXL8Q96CD0 374 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 NXPE2Q96DL1 559 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 SLC41A2Q96JW4 573 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 NRTNQ99748 197 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 PCBD2Q9H0N5 130 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 POLR1BQ9H9Y6 1135 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 CCDC177Q9NQR7 707 aaPredicted RBP11.51□□□□□ -0.57
PCNA-201ENST00000379143 UTP6Q9NYH9 597 aaKnown RBP11.51□□□□□ -0.57
PCNA-201ENST00000379143 STOX2Q9P2F5 926 aaPredicted RBP11.51□□□□□ -0.57
PCNA-201ENST00000379143 TBK1Q9UHD2 729 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 RNF112Q9ULX5 631 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 LOXL2Q9Y4K0 774 aa11.51□□□□□ -0.57
PCNA-201ENST00000379143 IGHV5-51A0A0C4DH38 117 aa11.5□□□□□ -0.57
PCNA-201ENST00000379143 KRT87PA6NCN2 255 aa11.5□□□□□ -0.57
PCNA-201ENST00000379143 SYCE1LA8MT33 242 aa11.5□□□□□ -0.57
PCNA-201ENST00000379143 RFPL1O75677 317 aa11.5□□□□□ -0.57
PCNA-201ENST00000379143 GUCA1CO95843 209 aa11.5□□□□□ -0.57
PCNA-201ENST00000379143 MT-ND3P03897 115 aa11.5□□□□□ -0.57
PCNA-201ENST00000379143 S100BP04271 92 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms