RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 SNX20Q7Z614 316 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 RNF168Q8IYW5 571 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-202ENST00000376839 WFDC5Q8TCV5 224 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 UBTD2Q8WUN7 234 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 BCL7CQ8WUZ0 217 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-202ENST00000376839 PLD4Q96BZ4 506 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 EGLN2Q96KS0 407 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 CDK5RAP1Q96SZ6 601 aaKnown RBP12.89□□□□□ -0.35
ACTN1-202ENST00000376839 VPS51Q9UID3 782 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 PMF1-BGLAPU3KQ54 211 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 C2orf78A6NCI8 922 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-202ENST00000376839 KPNA4O00629 521 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-202ENST00000376839 JRKO75564 520 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 STK16O75716 305 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 PARNO95453 639 aaKnown RBP12.89□□□□□ -0.35
ACTN1-202ENST00000376839 FUT4P22083 530 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 ACRV1P26436 265 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 ACVR2AP27037 513 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 EPHA2P29317 976 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 IL18R1Q13478 541 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 DGCR6Q14129 220 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 CHRNA6Q15825 494 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 RFX4Q33E94 735 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 TMEM236Q5W0B7 351 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 DOK6Q6PKX4 331 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 RNF165Q6ZSG1 346 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 TMEM132CQ8N3T6 1108 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 RORBQ92753 470 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 REXO5Q96IC2 774 aaKnown RBP12.89□□□□□ -0.35
ACTN1-202ENST00000376839 MROQ9BYG7 248 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 ZFYVE1Q9HBF4 777 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 TMEM165Q9HC07 324 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 HMG20AQ9NP66 347 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 MAN2B2Q9Y2E5 1009 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 PCDHGB1Q9Y5G3 927 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 M0QX08 132 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 TBL1XO60907 577 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 DNAJB5O75953 348 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 ALDH2P05091 517 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 BPIP17213 487 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 ITGALP20701 1170 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 CLDN8P56748 225 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 SLC35A2P78381 396 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 ZXDCQ2QGD7 858 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-202ENST00000376839 GLMNQ92990 594 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 TMEM161AQ9NX61 479 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 CRLS1Q9UJA2 301 aa12.89□□□□□ -0.35
ACTN1-202ENST00000376839 MYO1GB0I1T2 1018 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 hCG_2039718K7EN88 272 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 NADKO95544 446 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-202ENST00000376839 MT-ND2P03891 347 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 IL1RNP18510 177 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 SDC1P18827 310 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 NCS1P62166 190 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 FPGSQ05932 587 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 ACOX1Q15067 660 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 MFSD4AQ8N468 514 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 SELENOMQ8WWX9 145 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 YIPF6Q96EC8 236 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 CEP295NLQ96MC4 621 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 CASD1Q96PB1 797 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 DUSP21Q9H596 190 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 ATP13A3Q9H7F0 1226 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 DNMT3BQ9UBC3 853 aaKnown RBP12.88□□□□□ -0.35
ACTN1-202ENST00000376839 AFF4Q9UHB7 1163 aaKnown RBP12.88□□□□□ -0.35
ACTN1-202ENST00000376839 AP3M1Q9Y2T2 418 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 KRT87PA6NCN2 255 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 WNT9AO14904 365 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 SMAD6O43541 496 aaKnown RBP12.88□□□□□ -0.35
ACTN1-202ENST00000376839 NBNO60934 754 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 CLDN9O95484 217 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 FADS2O95864 444 aaKnown RBP12.88□□□□□ -0.35
ACTN1-202ENST00000376839 BMP4P12644 408 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 HMGA1P17096 107 aaKnown RBP12.88□□□□□ -0.35
ACTN1-202ENST00000376839 PSMB9P28065 219 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 TGFBR1P36897 503 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 CSKP41240 450 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 ABHD18Q0P651 414 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 INO80DQ53TQ3 878 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-202ENST00000376839 OR4F3Q6IEY1 312 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 VTCN1Q7Z7D3 282 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 FBXO22Q8NEZ5 403 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 UBE2FQ969M7 185 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 VMP1Q96GC9 406 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 BTBD2Q9BX70 525 aa12.88□□□□□ -0.35
ACTN1-202ENST00000376839 WDR12Q9GZL7 423 aaKnown RBP12.88□□□□□ -0.35
ACTN1-202ENST00000376839 TRBV5-4A0A0C4DH59 114 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 M0R3G1 203 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 KRT6AP02538 564 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 KRT6BP04259 564 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 HNF1BP35680 557 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 KRT6CP48668 564 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 PAGE2BQ5JRK9 111 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 OR2T5Q6IEZ7 315 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 CAPN13Q6MZZ7 669 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-202ENST00000376839 MACC1Q6ZN28 852 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 RNF175Q8N4F7 328 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 PAF1Q8N7H5 531 aa12.87□□□□□ -0.35
ACTN1-202ENST00000376839 OR2T29Q8NH02 315 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms