RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	RPS13	P62277	151 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	TBPL1	P62380	186 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	STX5	Q13190	355 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	MSLN	Q13421	630 aa	Predicted RBP	13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	PTGR1	Q14914	329 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	NNAT	Q16517	81 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	DEFB134	Q4QY38	66 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	CTSL3P	Q5NE16	218 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	CLNK	Q7Z7G1	428 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	LIX1	Q8N485	282 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	SDCCAG3	Q96C92	435 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	CNPPD1	Q9BV87	410 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	OR51B4	Q9Y5P0	310 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	SZT2	Q5T011	3432 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	ANK1	P16157	1881 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	SHOX2	O60902	331 aa	Predicted RBP	13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	NUDT14	O95848	222 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	UBE2Q1	Q7Z7E8	422 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	SDR16C5	Q8N3Y7	309 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	KIAA1191	Q96A73	305 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	ISG20	Q96AZ6	181 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	AHSP	Q9NZD4	102 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	TCF20	Q9UGU0	1960 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	TYROBP	O43914	113 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	HERVK_113	P63132	956 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	YBX1	P67809	324 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	MRPS21	P82921	87 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	PPP1R8	Q12972	351 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	MAPRE2	Q15555	327 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	LYSMD4	Q5XG99	296 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	MED27	Q6P2C8	311 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	EID2	Q8N6I1	236 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	RHBDD1	Q8TEB9	315 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	THAP3	Q8WTV1	239 aa	Predicted RBP	13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	NUDT8	Q8WV74	236 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	OR1E3	Q8WZA6	343 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	NELL2	Q99435	816 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	ERVK-6	Q9BXR3	956 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	LTB4R2	Q9NPC1	389 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	SLC23A2	Q9UGH3	650 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	ALPK2	Q86TB3	2170 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	BTN3A3	O00478	584 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	PI15	O43692	258 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	CISD3	P0C7P0	127 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	EPHA5	P54756	1037 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	FAM174B	Q3ZCQ3	159 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	DPPA4	Q7L190	304 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	OR4K1	Q8NGD4	311 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	OR9A1P	Q8NGU1	263 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	SPPL2A	Q8TCT8	520 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	HM13	Q8TCT9	377 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	FUBP1	Q96AE4	644 aa	Known RBP	13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	F2RL3	Q96RI0	385 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	TFB2M	Q9H5Q4	396 aa	Known RBP	13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	AKTIP	Q9H8T0	292 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	NUDT4	Q9NZJ9	180 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	MMP17	Q9ULZ9	603 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	RTTN	Q86VV8	2226 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	ARHGEF33	A8MVX0	844 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	PFKL	P17858	780 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	CMPK1	P30085	196 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	MAPK12	P53778	367 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	HPCA	P84074	193 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	RRM2B	Q7LG56	351 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	FAM110B	Q8TC76	370 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	XAGE5	Q8WWM1	108 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	GORASP1	Q9BQQ3	440 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	SEMA6A	Q9H2E6	1030 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	RAPGEFL1	Q9UHV5	662 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	DTNA	Q9Y4J8	743 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	MAP4K5	Q9Y4K4	846 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	C8G	P07360	202 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	COL6A2	P12110	1019 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	HPGD	P15428	266 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	RYK	P34925	604 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	MANF	P55145	182 aa	Known RBP	13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	BTN3A2	P78410	334 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	RALGPS1	Q5JS13	557 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	GPR65	Q8IYL9	337 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	TAGAP	Q8N103	731 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	CLEC4F	Q8N1N0	589 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	PYDC1	Q8WXC3	89 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	SLC9A6	Q92581	669 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	NAF1	Q96HR8	494 aa	Known RBP	13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	CNDP1	Q96KN2	507 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	TMEM109	Q9BVC6	243 aa		13.15	□□□□□ -0.3
DDR1-225	ENST00000376568	BCAT2	O15382	392 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	IMPDH1	P20839	514 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	PIK3R1	P27986	724 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	CA5A	P35218	305 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	IDH3A	P50213	366 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	MAP7	Q14244	749 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	TRIP10	Q15642	601 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	TMEM207	Q6UWW9	146 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	CHSY3	Q70JA7	882 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	KY	Q8NBH2	561 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC13A3	Q8WWT9	602 aa		13.14	□□□□□ -0.31
DDR1-225	ENST00000376568	AURKB	Q96GD4	344 aa	Predicted RBP	13.14	□□□□□ -0.31

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