RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ZDHHC11BP0C7U3 371 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 DBTP11182 482 aaKnown RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 HMGA1P17096 107 aaKnown RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 CD86P42081 329 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 CLK1P49759 484 aaKnown RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 WNT3AP56704 352 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 RPS24P62847 133 aaKnown RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 ERVK-8P63133 956 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 PRKG2Q13237 762 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 PLD1Q13393 1074 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 CDK10Q15131 360 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 ATP6AP1LQ52LC2 224 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 DENND1CQ8IV53 801 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 ZNF540Q8NDQ6 660 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 OR2T12Q8NG77 320 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 ELMO1Q92556 727 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 GORASP2Q9H8Y8 452 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 OR2A25A4D2G3 310 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 CLDN24A6NM45 220 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 PDZK1P1A8MUH7 402 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 CCRL2O00421 344 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 NRG2O14511 850 aaPredicted RBP12.61□□□□□ -0.39
MSH5-204ENST00000375755 COCHO43405 550 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 RGS10O43665 173 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 TSPAN3O60637 253 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 PGLSO95336 258 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 ITGAMP11215 1152 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 MYCLP1P12525 358 aaPredicted RBP12.61□□□□□ -0.39
MSH5-204ENST00000375755 FDXRP22570 491 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 OR1E1P30953 314 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 ZNF135P52742 658 aaPredicted RBP12.61□□□□□ -0.39
MSH5-204ENST00000375755 OR2B6P58173 313 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 LAPTM4AQ15012 233 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 C6orf136Q5SQH8 315 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 NXNL2Q5VZ03 156 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 IQCF2Q8IXL9 164 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 MICU2Q8IYU8 434 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 FNDC5Q8NAU1 212 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 DMRTB1Q96MA1 342 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 ZNF599Q96NL3 588 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 CCDC115Q96NT0 180 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 SLC22A12Q96S37 553 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 BARD1Q99728 777 aaKnown RBP12.61□□□□□ -0.39
MSH5-204ENST00000375755 TMEM246Q9BRR3 403 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 REXO4Q9GZR2 422 aaKnown RBP12.61□□□□□ -0.39
MSH5-204ENST00000375755 RIBC2Q9H4K1 309 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 PLSCR3Q9NRY6 295 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 TMEM248Q9NWD8 314 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 SCN3BQ9NY72 215 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 ANAPC1Q9H1A4 1944 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 SUPT3HB4E1H0 165 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 MMP2P08253 660 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 RHOQP17081 205 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 ENDOUP21128 410 aaKnown RBP12.61□□□□□ -0.39
MSH5-204ENST00000375755 LIPAP38571 399 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 HTR3AP46098 478 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 KRT6CP48668 564 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 GALK2Q01415 458 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 PLEKHG6Q3KR16 790 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 ZC3H12BQ5HYM0 836 aaKnown RBP12.61□□□□□ -0.39
MSH5-204ENST00000375755 ZCCHC8Q6NZY4 707 aaKnown RBP12.61□□□□□ -0.39
MSH5-204ENST00000375755 OTOP2Q7RTS6 562 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 CYP4Z1Q86W10 505 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 CHPFQ8IZ52 775 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 UMODL1-AS1Q8N2C9 162 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 ZNF548Q8NEK5 533 aaPredicted RBP12.61□□□□□ -0.39
MSH5-204ENST00000375755 OR10A6Q8NH74 314 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 VNN3Q9NY84 501 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 VAPAQ9P0L0 249 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 IKZF3Q9UKT9 509 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 ANGPTL3Q9Y5C1 460 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 ORC6Q9Y5N6 252 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 PTPRSQ13332 1948 aa12.61□□□□□ -0.39
MSH5-204ENST00000375755 IGLV3-10A0A075B6K4 115 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ZNF840PA6NDX5 716 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 DSCR3O14972 297 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ZW10O43264 779 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 PAPSS2O95340 614 aaPredicted RBP12.6□□□□□ -0.39
MSH5-204ENST00000375755 ABCB1P08183 1280 aaPredicted RBP12.6□□□□□ -0.39
MSH5-204ENST00000375755 TACR2P21452 398 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 IL1RL1Q01638 556 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ELAVL2Q12926 359 aaKnown RBP12.6□□□□□ -0.39
MSH5-204ENST00000375755 PRSS36Q5K4E3 855 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ADHFE1Q8IWW8 467 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 DCBLD1Q8N8Z6 715 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 OR7D4Q8NG98 312 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 BHMTQ93088 406 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 CRISPLD2Q9H0B8 497 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ACTL8Q9H568 366 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 IKZF5Q9H5V7 419 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 SNX6Q9UNH7 406 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 PKP3Q9Y446 797 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 KCTD3Q9Y597 815 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ZFP37Q9Y6Q3 630 aaPredicted RBP12.6□□□□□ -0.39
MSH5-204ENST00000375755 MAU2Q9Y6X3 613 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 AIREO43918 545 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ZNF37AP17032 561 aaPredicted RBP12.6□□□□□ -0.39
MSH5-204ENST00000375755 IGFBP5P24593 272 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 AGTR2P50052 363 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 GNG2P59768 71 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms