RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 POP7O75817 140 aaKnown RBP11.77□□□□□ -0.53
LSM2-208ENST00000375661 CLDN1O95832 211 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 S1PR4O95977 384 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 C1QAP02745 245 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 MYBL2P10244 700 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 RALBP11234 206 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 SSTR1P30872 391 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 TTPAP49638 278 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 THOC5Q13769 683 aaKnown RBP11.77□□□□□ -0.53
LSM2-208ENST00000375661 BCL7AQ4VC05 210 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 PRR30Q53SZ7 412 aaPredicted RBP11.77□□□□□ -0.53
LSM2-208ENST00000375661 ZNF789Q5FWF6 425 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 UBAP2Q5T6F2 1119 aaKnown RBP11.77□□□□□ -0.53
LSM2-208ENST00000375661 ZNF787Q6DD87 383 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 ZNF470Q6ECI4 717 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 SDCCAG8Q86SQ7 713 aaPredicted RBP11.77□□□□□ -0.53
LSM2-208ENST00000375661 CILP2Q8IUL8 1156 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 RELL1Q8IUW5 271 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 CNTN4Q8IWV2 1026 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 PALM2Q8IXS6 379 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 LMNTD2Q8IXW0 634 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 DSELQ8IZU8 1212 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 IQCKQ8N0W5 287 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 ENDOVQ8N8Q3 282 aaKnown RBP11.77□□□□□ -0.53
LSM2-208ENST00000375661 LPGAT1Q92604 370 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 FMO2Q99518 471 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 NUDT9Q9BW91 350 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 P2RY12Q9H244 342 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 CHST8Q9H2A9 424 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 FANCEQ9HB96 536 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 SMYD2Q9NRG4 433 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 HRASLS2Q9NWW9 162 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 GPR83Q9NYM4 423 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.77□□□□□ -0.53
LSM2-208ENST00000375661 ERRFI1Q9UJM3 462 aaPredicted RBP11.77□□□□□ -0.53
LSM2-208ENST00000375661 TCFL5Q9UL49 500 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 SLC5A6Q9Y289 635 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 V9GYY5 206 aaPredicted RBP11.77□□□□□ -0.53
LSM2-208ENST00000375661 ITPR2Q14571 2701 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 DOPEY1Q5JWR5 2465 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 PIKFYVEQ9Y2I7 2098 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 MATN2O00339 956 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 NDUFS3O75489 264 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 AP2A2O94973 939 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 CBX6O95503 412 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 MSL3P1P0C860 447 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 MTHFD1P11586 935 aaKnown RBP11.76□□□□□ -0.53
LSM2-208ENST00000375661 GABRB3P28472 473 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 TNFRSF8P28908 595 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 SLC1A2P43004 574 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 PRLHRP49683 370 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 MPP1Q00013 466 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 ZNF658BQ4V348 819 aaPredicted RBP11.76□□□□□ -0.53
LSM2-208ENST00000375661 PLEKHS1Q5SXH7 462 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 TEDDM1Q5T9Z0 273 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 VWA5B1Q5TIE3 1220 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 ARMC6Q6NXE6 501 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 CAPN12Q6ZSI9 719 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 C3orf62Q6ZUJ4 267 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 GSPT2Q8IYD1 628 aaKnown RBP11.76□□□□□ -0.53
LSM2-208ENST00000375661 SLC34A3Q8N130 599 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 OTUD6BQ8N6M0 293 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 C2CD4AQ8NCU7 369 aaPredicted RBP11.76□□□□□ -0.53
LSM2-208ENST00000375661 CALML6Q8TD86 181 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 LINC00615Q96LM1 132 aaPredicted RBP11.76□□□□□ -0.53
LSM2-208ENST00000375661 C5orf34Q96MH7 638 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 IP6K3Q96PC2 410 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 TCF12Q99081 682 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 TTC1Q99614 292 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 DPH2Q9BQC3 489 aaPredicted RBP11.76□□□□□ -0.53
LSM2-208ENST00000375661 FAM167BQ9BTA0 163 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 FBXO6Q9NRD1 293 aaPredicted RBP11.76□□□□□ -0.53
LSM2-208ENST00000375661 NINJ2Q9NZG7 142 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 SLC17A6Q9P2U8 582 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 FBXO5Q9UKT4 447 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 NUP210LQ5VU65 1888 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 PCM1Q15154 2024 aa11.76□□□□□ -0.53
LSM2-208ENST00000375661 SPTBP11277 2137 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 TCRBV9S1A1TA0A576 114 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 PRMT5O14744 637 aaPredicted RBP11.75□□□□□ -0.53
LSM2-208ENST00000375661 HAUS5O94927 633 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 GSTA2P09210 222 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 FAM153BP0C7A2 387 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 RPS3P23396 243 aaKnown RBP eCLIP11.75□□□□□ -0.532e-11■■■□□ 19.2
LSM2-208ENST00000375661 RORAP35398 523 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 PPARGP37231 505 aaPredicted RBP11.75□□□□□ -0.53
LSM2-208ENST00000375661 ITGA1P56199 1179 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 NR6A1Q15406 480 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 GPR19Q15760 415 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 KYNUQ16719 465 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 ERCC6LQ2NKX8 1250 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 FAM153CQ494X1 144 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 CTSL3PQ5NE16 218 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 METRNLQ641Q3 311 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 FAM83HQ6ZRV2 1179 aaPredicted RBP11.75□□□□□ -0.53
LSM2-208ENST00000375661 CYS1Q717R9 158 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 RAB43Q86YS6 212 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 ZBTB2Q8N680 514 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 LILRA3Q8N6C8 439 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms