RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 DENND4BO75064 1496 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 PAPSS2O95340 614 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 NDUFB10O96000 172 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 MIPP30301 263 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 CAP2P40123 477 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 CACNB2Q08289 660 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 GCNT6Q5T4J0 391 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 MS4A15Q8N5U1 240 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 SLC22A17Q8WUG5 538 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 PABPC5Q96DU9 382 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 OR11A1Q9GZK7 315 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 LHX5Q9H2C1 402 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 SH3BGRL2Q9UJC5 107 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 PCDHGA6Q9Y5G7 932 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 A0A1W2PRQ8 180 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ISM1B1AKI9 464 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 CDRT1O95170 752 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 HEXBP07686 556 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 TMEM132DQ14C87 1099 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 TMEM139Q8IV31 216 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 OR2L5Q8NG80 312 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ZNF606Q8WXB4 792 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 CDADC1Q9BWV3 514 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 TMLHEQ9NVH6 421 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 SH2B3Q9UQQ2 575 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 CPED1A4D0V7 1026 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 FAM221BA6H8Z2 402 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 FMO4P31512 558 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 OPRL1P41146 370 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 NUP54Q7Z3B4 507 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 PCDHB18PQ96TA0 734 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 CDHR5Q9HBB8 845 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ASXL2Q76L83 1435 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 KDM5BQ9UGL1 1544 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 DFFBO76075 338 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 POLR2LP62875 67 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 GRB10Q13322 594 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 LILRB1Q8NHL6 650 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 C20orf202A1L168 122 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 A8MXE2 369 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 MCAMP43121 646 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 OSTNP61366 133 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ZNF177Q13360 481 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 FCN2Q15485 313 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 VARS2Q5ST30 1063 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 PAPOLGQ9BWT3 736 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 CFAP97Q9P2B7 532 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 U3KQV3 271 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 SLC43A1O75387 559 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 MYBP10242 640 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 NKX2-5P52952 324 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 RPL23AP62750 156 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 LARS2Q15031 903 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 FAM136AQ96C01 138 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 TUBG2Q9NRH3 451 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 TMEM72A0PK05 275 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ANXA2P2A6NMY6 339 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ANXA2P07355 339 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 NFYBP25208 207 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 PFKPQ01813 784 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 IL31Q6EBC2 164 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 SYT12Q8IV01 421 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 SYT4Q9H2B2 425 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 SACM1LQ9NTJ5 587 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 TEX13CA0A0J9YWL9 993 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 PP2D1A8MPX8 630 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 CSF2RAP15509 400 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 HOXA13P31271 388 aaPredicted RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 CDH15P55291 814 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ABCA11PQ4W5N1 156 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 KCTD1Q719H9 257 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ESX1Q8N693 406 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 OR4F6Q8NGB9 312 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 FAM84BQ96KN1 310 aaPredicted RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 ZDHHC18Q9NUE0 388 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 INTS7Q9NVH2 962 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 TFCP2L1Q9NZI6 479 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ZNF705GA8MUZ8 300 aaPredicted RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 MAPK8P45983 427 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 MRPL19P49406 292 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 HSPA14Q0VDF9 509 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 PUM1Q14671 1186 aaKnown RBP eCLIP6.48□□□□□ -1.376e-7■■□□□ 14.5
UBR4-204ENST00000375254 FAM214AQ32MH5 1076 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 MAP1SQ66K74 1059 aaPredicted RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 ZSWIM9Q86XI8 627 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 GEMIN6Q8WXD5 167 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 CELF1Q92879 486 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 ZNF302Q9NR11 478 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ERVW-1Q9UQF0 538 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 TLR5O60602 858 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 WDR4P57081 412 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 FASTKD3Q14CZ7 662 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 ZBTB46Q86UZ6 589 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ZNF433Q8N7K0 673 aaPredicted RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 POMGNT2Q8NAT1 580 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 ZFAND1Q8TCF1 268 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 RNF141Q8WVD5 230 aa6.48□□□□□ -1.37
UBR4-204ENST00000375254 MRM3Q9HC36 420 aaKnown RBP6.48□□□□□ -1.37
UBR4-204ENST00000375254 ZNF804BA4D1E1 1349 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms