RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 PRDX6P30041 224 aa8.8□□□□□ -1
UBR4-201ENST00000375218 KIAA1024LP59773 190 aa8.8□□□□□ -1
UBR4-201ENST00000375218 SPIBQ01892 262 aa8.8□□□□□ -1
UBR4-201ENST00000375218 ATP1A4Q13733 1029 aa8.8□□□□□ -1
UBR4-201ENST00000375218 SFRP5Q5T4F7 317 aa8.8□□□□□ -1
UBR4-201ENST00000375218 NADSYN1Q6IA69 706 aa8.8□□□□□ -1
UBR4-201ENST00000375218 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.8□□□□□ -1
UBR4-201ENST00000375218 MARC2Q969Z3 335 aa8.8□□□□□ -1
UBR4-201ENST00000375218 APOLD1Q96LR9 279 aa8.8□□□□□ -1
UBR4-201ENST00000375218 SSX3Q99909 188 aa8.8□□□□□ -1
UBR4-201ENST00000375218 OR51B5Q9H339 312 aa8.8□□□□□ -1
UBR4-201ENST00000375218 COLQQ9Y215 455 aaPredicted RBP8.8□□□□□ -1
UBR4-201ENST00000375218 HSPA12AO43301 675 aa8.8□□□□□ -1
UBR4-201ENST00000375218 ITGBL1O95965 494 aaPredicted RBP8.8□□□□□ -1
UBR4-201ENST00000375218 BDKRB2P30411 391 aa8.8□□□□□ -1
UBR4-201ENST00000375218 PSMB10P40306 273 aa8.8□□□□□ -1
UBR4-201ENST00000375218 GATA4P43694 442 aa8.8□□□□□ -1
UBR4-201ENST00000375218 BST1Q10588 318 aa8.8□□□□□ -1
UBR4-201ENST00000375218 DGCR6Q14129 220 aa8.8□□□□□ -1
UBR4-201ENST00000375218 ZNF697Q5TEC3 545 aa8.8□□□□□ -1
UBR4-201ENST00000375218 PEAR1Q5VY43 1037 aaPredicted RBP8.8□□□□□ -1
UBR4-201ENST00000375218 BLOC1S3Q6QNY0 202 aa8.8□□□□□ -1
UBR4-201ENST00000375218 CHST14Q8NCH0 376 aa8.8□□□□□ -1
UBR4-201ENST00000375218 SPSB4Q96A44 273 aa8.8□□□□□ -1
UBR4-201ENST00000375218 C12orf57Q99622 126 aa8.8□□□□□ -1
UBR4-201ENST00000375218 RNF26Q9BY78 433 aaPredicted RBP8.8□□□□□ -1
UBR4-201ENST00000375218 ZNHIT2Q9UHR6 403 aa8.8□□□□□ -1
UBR4-201ENST00000375218 FREM2Q5SZK8 3169 aa8.8□□□□□ -1
UBR4-201ENST00000375218 A0A1W2PP55 124 aa8.8□□□□□ -1
UBR4-201ENST00000375218 AKR1D1P51857 326 aa8.8□□□□□ -1
UBR4-201ENST00000375218 NUP107P57740 925 aa8.8□□□□□ -1
UBR4-201ENST00000375218 RAB4BP61018 213 aa8.8□□□□□ -1
UBR4-201ENST00000375218 ST8SIA6P61647 398 aa8.8□□□□□ -1
UBR4-201ENST00000375218 DHX9Q08211 1270 aaKnown RBP8.8□□□□□ -1
UBR4-201ENST00000375218 MZT1Q08AG7 82 aa8.8□□□□□ -1
UBR4-201ENST00000375218 TMEM115Q12893 351 aaPredicted RBP8.8□□□□□ -1
UBR4-201ENST00000375218 IL11RAQ14626 422 aa8.8□□□□□ -1
UBR4-201ENST00000375218 SGCBQ16585 318 aa8.8□□□□□ -1
UBR4-201ENST00000375218 HYAL4Q2M3T9 481 aa8.8□□□□□ -1
UBR4-201ENST00000375218 TMEM44Q2T9K0 475 aa8.8□□□□□ -1
UBR4-201ENST00000375218 MEDAGQ5VYS4 303 aa8.8□□□□□ -1
UBR4-201ENST00000375218 USP30Q70CQ3 517 aa8.8□□□□□ -1
UBR4-201ENST00000375218 ITIH5Q86UX2 942 aa8.8□□□□□ -1
UBR4-201ENST00000375218 LDHDQ86WU2 507 aa8.8□□□□□ -1
UBR4-201ENST00000375218 TSEN15Q8WW01 171 aaKnown RBP8.8□□□□□ -1
UBR4-201ENST00000375218 CFHR4Q92496 578 aa8.8□□□□□ -1
UBR4-201ENST00000375218 ITPKCQ96DU7 683 aa8.8□□□□□ -1
UBR4-201ENST00000375218 TRIM31Q9BZY9 425 aa8.8□□□□□ -1
UBR4-201ENST00000375218 SLC6A16Q9GZN6 736 aa8.8□□□□□ -1
UBR4-201ENST00000375218 CHRDQ9H2X0 955 aa8.8□□□□□ -1
UBR4-201ENST00000375218 TCAF2A6NFQ2 919 aa8.79□□□□□ -1
UBR4-201ENST00000375218 ERI2A8K979 691 aaKnown RBP8.79□□□□□ -1
UBR4-201ENST00000375218 MPIP34949 423 aa8.79□□□□□ -1
UBR4-201ENST00000375218 PTSQ03393 145 aa8.79□□□□□ -1
UBR4-201ENST00000375218 IL18Q14116 193 aa8.79□□□□□ -1
UBR4-201ENST00000375218 NPTX1Q15818 432 aa8.79□□□□□ -1
UBR4-201ENST00000375218 ZNF484Q5JVG2 852 aa8.79□□□□□ -1
UBR4-201ENST00000375218 LRRC66Q68CR7 880 aa8.79□□□□□ -1
UBR4-201ENST00000375218 FAM171BQ6P995 826 aa8.79□□□□□ -1
UBR4-201ENST00000375218 NUDCD3Q8IVD9 361 aa8.79□□□□□ -1
UBR4-201ENST00000375218 DCP1BQ8IZD4 617 aaKnown RBP8.79□□□□□ -1
UBR4-201ENST00000375218 CYP4Z2PQ8N1L4 340 aa8.79□□□□□ -1
UBR4-201ENST00000375218 REPS2Q8NFH8 660 aa8.79□□□□□ -1
UBR4-201ENST00000375218 S100PBPQ96BU1 408 aa8.79□□□□□ -1
UBR4-201ENST00000375218 RGCCQ9H4X1 137 aa8.79□□□□□ -1
UBR4-201ENST00000375218 A0A087WZY1 265 aa8.79□□□□□ -1
UBR4-201ENST00000375218 ELOVL7A1L3X0 281 aa8.79□□□□□ -1
UBR4-201ENST00000375218 CCRL2O00421 344 aa8.79□□□□□ -1
UBR4-201ENST00000375218 EML1O00423 815 aa8.79□□□□□ -1
UBR4-201ENST00000375218 ECI2O75521 394 aa8.79□□□□□ -1
UBR4-201ENST00000375218 RASAL1O95294 804 aa8.79□□□□□ -1
UBR4-201ENST00000375218 PRPS1L1P21108 318 aa8.79□□□□□ -1
UBR4-201ENST00000375218 OR1E1P30953 314 aa8.79□□□□□ -1
UBR4-201ENST00000375218 CARSP49589 748 aaKnown RBP8.79□□□□□ -1
UBR4-201ENST00000375218 ITGA1P56199 1179 aa8.79□□□□□ -1
UBR4-201ENST00000375218 POU6F2P78424 691 aaPredicted RBP8.79□□□□□ -1
UBR4-201ENST00000375218 MEF2AQ02078 507 aaPredicted RBP8.79□□□□□ -1
UBR4-201ENST00000375218 ILF3Q12906 894 aaKnown RBP eCLIP8.79□□□□□ -1
UBR4-201ENST00000375218 PNOCQ13519 176 aa8.79□□□□□ -1
UBR4-201ENST00000375218 STXBP2Q15833 593 aa8.79□□□□□ -1
UBR4-201ENST00000375218 TMEM177Q53S58 311 aa8.79□□□□□ -1
UBR4-201ENST00000375218 FAM160B1Q5W0V3 765 aa8.79□□□□□ -1
UBR4-201ENST00000375218 BHLHB9Q6PI77 547 aa8.79□□□□□ -1
UBR4-201ENST00000375218 KANSL1Q7Z3B3 1105 aa8.79□□□□□ -1
UBR4-201ENST00000375218 PEX26Q7Z412 305 aa8.79□□□□□ -1
UBR4-201ENST00000375218 PROSER1Q86XN7 944 aa8.79□□□□□ -1
UBR4-201ENST00000375218 UXS1Q8NBZ7 420 aa8.79□□□□□ -1
UBR4-201ENST00000375218 GALNT11Q8NCW6 608 aa8.79□□□□□ -1
UBR4-201ENST00000375218 RAET1EQ8TD07 263 aa8.79□□□□□ -1
UBR4-201ENST00000375218 NECAB3Q96P71 396 aaPredicted RBP8.79□□□□□ -1
UBR4-201ENST00000375218 COLEC11Q9BWP8 271 aa8.79□□□□□ -1
UBR4-201ENST00000375218 GPN1Q9HCN4 374 aaPredicted RBP8.79□□□□□ -1
UBR4-201ENST00000375218 PRDM8Q9NQV8 689 aa8.79□□□□□ -1
UBR4-201ENST00000375218 MRPL22Q9NWU5 206 aaKnown RBP8.79□□□□□ -1
UBR4-201ENST00000375218 TOR1AO14656 332 aa8.79□□□□□ -1
UBR4-201ENST00000375218 DENRO43583 198 aaKnown RBP8.79□□□□□ -1
UBR4-201ENST00000375218 NRP2O60462 931 aa8.79□□□□□ -1
UBR4-201ENST00000375218 EDNRBP24530 442 aa8.79□□□□□ -1
UBR4-201ENST00000375218 STX2P32856 288 aa8.79□□□□□ -1
UBR4-201ENST00000375218 GSSP48637 474 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms