RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 BRD3Q15059 726 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 INO80DQ53TQ3 878 aaPredicted RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 FAM78AQ5JUQ0 283 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 DNTTIP2Q5QJE6 756 aaKnown RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 GFI1BQ5VTD9 330 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 TAF3Q5VWG9 929 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 ARHGAP17Q68EM7 881 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 TANGO2Q6ICL3 276 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 DENND1BQ6P3S1 775 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 TMEM71Q6P5X7 295 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 ENOSF1Q7L5Y1 443 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 PIGZQ86VD9 579 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 SLC47A2Q86VL8 602 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 NUP93Q8N1F7 819 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 TTC39CQ8N584 583 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 MAB21L3Q8N8X9 362 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 LEMD2Q8NC56 503 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 NEK11Q8NG66 645 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 C2CD4CQ8TF44 421 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 NDRG1Q92597 394 aaKnown RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 MRPS31Q92665 395 aaKnown RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 FGF14Q92915 247 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 SECISBP2LQ93073 1101 aaKnown RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 FBXO32Q969P5 355 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 PHF21BQ96EK2 531 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 SPATA17Q96L03 361 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 SLITRK1Q96PX8 696 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 ERGIC2Q96RQ1 377 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 SLC22A12Q96S37 553 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 RPP25Q9BUL9 199 aaKnown RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 IFT27Q9BW83 186 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 DUSP16Q9BY84 665 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 PLA2G2FQ9BZM2 168 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 KLHL31Q9H511 634 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 FAM124BQ9H5Z6 455 aaPredicted RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 IFNKQ9P0W0 207 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 EPS15L1Q9UBC2 864 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 UXTQ9UBK9 157 aaPredicted RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 KCND3Q9UK17 655 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 CCL26Q9Y258 94 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 DOCK7Q96N67 2140 aa4.46□□□□□ -1.69
PMS1-202ENST00000374826 KNL1Q8NG31 2342 aa4.46□□□□□ -1.69
PMS1-202ENST00000374826 TRAV19A0A0A6YYK7 116 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 FAM90A20PA6NIJ5 464 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 PRSS47A8MTI9 375 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 ANHXE9PGG2 379 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 MS4A18H0YCH9 400 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 XPO1O14980 1071 aaKnown RBP4.46□□□□□ -1.7
PMS1-202ENST00000374826 FGF19O95750 216 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 CAVIN2O95810 425 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 MBL2P11226 248 aaPredicted RBP4.46□□□□□ -1.7
PMS1-202ENST00000374826 FCGR2AP12318 317 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 KRTAP5-9P26371 169 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 AVPR1AP37288 418 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 PPP3CCP48454 512 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 TKTL1P51854 596 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 UBASH3AP57075 661 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 SLC8A3P57103 927 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 ABATP80404 500 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 CRYZQ08257 329 aaKnown RBP4.46□□□□□ -1.7
PMS1-202ENST00000374826 FILIP1LQ4L180 1135 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 PMF1Q6P1K2 205 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 LCLAT1Q6UWP7 414 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 VITQ6UXI7 678 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 Q6ZSV7 163 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 MTSS1LQ765P7 747 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 ZNF367Q7RTV3 350 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 CACNA2D4Q7Z3S7 1137 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 GALNT7Q86SF2 657 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 ARID3BQ8IVW6 561 aaPredicted RBP4.46□□□□□ -1.7
PMS1-202ENST00000374826 FAM71AQ8IYT1 594 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 CACNA2D3Q8IZS8 1091 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 SIX6OS1Q8N1H7 587 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 HORMAD2Q8N7B1 307 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 ANKRD52Q8NB46 1076 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 C1orf131Q8NDD1 294 aaKnown RBP4.46□□□□□ -1.7
PMS1-202ENST00000374826 SLC20A1Q8WUM9 679 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 FAR1Q8WVX9 515 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 SMARCD2Q92925 531 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 FAM81BQ96LP2 452 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 CEP295NLQ96MC4 621 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 NAP1L5Q96NT1 182 aaPredicted RBP4.46□□□□□ -1.7
PMS1-202ENST00000374826 SPAG5Q96R06 1193 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 CYP2S1Q96SQ9 504 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 DDX23Q9BUQ8 820 aaKnown RBP4.46□□□□□ -1.7
PMS1-202ENST00000374826 CADM1Q9BY67 442 aaKnown RBP4.46□□□□□ -1.7
PMS1-202ENST00000374826 ULBP1Q9BZM6 244 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 XPO4Q9C0E2 1151 aaKnown RBP4.46□□□□□ -1.7
PMS1-202ENST00000374826 MIS12Q9H081 205 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 FBXO44Q9H4M3 255 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 NMUR1Q9HB89 426 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 LRRC4Q9HBW1 653 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 ZFP14Q9HCL3 533 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 CSNK1G1Q9HCP0 422 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 CD93Q9NPY3 652 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 OSER1Q9NX31 292 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 GDE1Q9NZC3 331 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 EHD2Q9NZN4 543 aa4.46□□□□□ -1.7
PMS1-202ENST00000374826 PLEKHB1Q9UF11 243 aaPredicted RBP4.46□□□□□ -1.7
PMS1-202ENST00000374826 CHORDC1Q9UHD1 332 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms