RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 TAS2R1Q9NYW7 299 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 TMEM216Q9P0N5 145 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 PLA2G4CQ9UP65 541 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 SSX2IPQ9Y2D8 614 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 DNAJC16Q9Y2G8 782 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 AAR2Q9Y312 384 aaKnown RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 LRRC42Q9Y546 428 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 SNX10Q9Y5X0 201 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 CDY1Q9Y6F8 540 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 DGKBQ9Y6T7 804 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 TANC1Q9C0D5 1861 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 CENPFP49454 3210 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 A0A088AWK7 358 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 A0A096LPK6 155 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 KCNU1A8MYU2 1149 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 G3V2L1 256 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 LIN7AO14910 233 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 SLC22A2O15244 555 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 CA12O43570 354 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ITM2AO43736 263 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 AP1G1O43747 822 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ENTPD5O75356 428 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 LYPLA1O75608 230 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 CABYRO75952 493 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 TM7SF2O76062 418 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 LUC7L3O95232 432 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 PSMG1O95456 288 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 PGK1P00558 417 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 JCHAINP01591 159 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 C2P06681 752 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ENO1P06733 434 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 ASGR1P07306 291 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 NMBRP28336 390 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ADRA1AP35348 466 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 PGM1P36871 562 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 LIPAP38571 399 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 THPOP40225 353 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 VHLP40337 213 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 MAGEA11P43364 429 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 BRCC3P46736 316 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 NUMBP49757 651 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 WNT3P56703 355 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 RAB1AP62820 205 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 IRX4P78413 519 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 SATB1Q01826 763 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 YWHAHQ04917 246 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 DSC1Q08554 894 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ILF2Q12905 390 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 OLIG2Q13516 323 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ITGA9Q13797 1035 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 E2F2Q14209 437 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 PDCD2Q16342 344 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 TRMT5Q32P41 509 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 HSP90AA5PQ58FG0 334 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ACSBG2Q5FVE4 666 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 CERCAMQ5T4B2 595 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 C6orf163Q5TEZ5 329 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ARHGAP40Q5TG30 622 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 METTL21CQ5VZV1 264 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 KIAA0930Q6ICG6 404 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 RFWD3Q6PCD5 774 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 CES3Q6UWW8 571 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ZYG11AQ6WRX3 759 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ZNF782Q6ZMW2 699 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 KIAA0408Q6ZU52 694 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 NET1Q7Z628 596 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 CMC1Q7Z7K0 106 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 SCD5Q86SK9 330 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ZC3HC1Q86WB0 502 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 SPATA2LQ8IUW3 424 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 ARHGAP18Q8N392 663 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 RTL3Q8N8U3 475 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 PCSK9Q8NBP7 692 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 RBM15BQ8NDT2 890 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 PPHLN1Q8NEY8 458 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 RP9Q8TA86 221 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 DDB2Q92466 427 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 N4BP2L2Q92802 583 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 CASP10Q92851 521 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 MRGPRX1Q96LB2 322 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 SGCZQ96LD1 299 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 C1orf74Q96LT6 269 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 RILPQ96NA2 401 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ZNF570Q96NI8 536 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 RANBP9Q96S59 729 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 MYCBPQ99417 103 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 EBF4Q9BQW3 602 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 C1QTNF1Q9BXJ1 281 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 SLC29A3Q9BZD2 475 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ZCWPW1Q9H0M4 648 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 SLC25A51Q9H1U9 297 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 NMRAL1Q9HBL8 299 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ENTPD7Q9NQZ7 604 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 RGS18Q9NS28 235 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 IARS2Q9NSE4 1012 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 C20orf96Q9NUD7 363 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 TBC1D13Q9NVG8 400 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 OSER1Q9NX31 292 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 DLL3Q9NYJ7 618 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms