RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 BEX2Q9BXY8 128 aa9.54□□□□□ -0.88
CSMD2-203ENST00000373377 SLIRPQ9GZT3 109 aaKnown RBP9.54□□□□□ -0.88
CSMD2-203ENST00000373377 OR51E2Q9H255 320 aa9.54□□□□□ -0.88
CSMD2-203ENST00000373377 TRIT1Q9H3H1 467 aaKnown RBP9.54□□□□□ -0.88
CSMD2-203ENST00000373377 PRDM5Q9NQX1 630 aaPredicted RBP9.54□□□□□ -0.88
CSMD2-203ENST00000373377 NLE1Q9NVX2 485 aaPredicted RBP9.54□□□□□ -0.88
CSMD2-203ENST00000373377 ZFP37Q9Y6Q3 630 aaPredicted RBP9.54□□□□□ -0.88
CSMD2-203ENST00000373377 TNFRSF10BO14763 440 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 SCELO95171 688 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 SLC25A14O95258 325 aaPredicted RBP9.53□□□□□ -0.88
CSMD2-203ENST00000373377 TTPAP49638 278 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 SUOXP51687 545 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 RPP38P78345 283 aaKnown RBP9.53□□□□□ -0.88
CSMD2-203ENST00000373377 SLC35A2P78381 396 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 VLDLRP98155 873 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 ATXN7L2Q5T6C5 722 aaPredicted RBP9.53□□□□□ -0.88
CSMD2-203ENST00000373377 MFSD4BQ5TF39 518 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 PLEKHH3Q7Z736 793 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 ZNF280BQ86YH2 543 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 DENND1CQ8IV53 801 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 SPPL2AQ8TCT8 520 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 SELENOMQ8WWX9 145 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 CLPBQ9H078 707 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 RMND5AQ9H871 391 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 GORASP2Q9H8Y8 452 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 NEK6Q9HC98 313 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 ELOVL2Q9NXB9 296 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 FLRT1Q9NZU1 646 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 SNX6Q9UNH7 406 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 TESMINQ9Y4I5 508 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 PCDHGA3Q9Y5H0 932 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 IDH3BO43837 385 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 CCDC159P0C7I6 412 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 BCKDHAP12694 445 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 HOXB8P17481 243 aaPredicted RBP9.53□□□□□ -0.88
CSMD2-203ENST00000373377 POU1F1P28069 291 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 GKP32189 559 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 ZNF140P52738 457 aaPredicted RBP9.53□□□□□ -0.88
CSMD2-203ENST00000373377 CRISP3P54108 245 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 PHC1P78364 1004 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 GRIK2Q13002 908 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 TSTA3Q13630 321 aaPredicted RBP9.53□□□□□ -0.88
CSMD2-203ENST00000373377 GBX1Q14549 363 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 CBX2Q14781 532 aaPredicted RBP9.53□□□□□ -0.88
CSMD2-203ENST00000373377 TAB1Q15750 504 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 TIGD6Q17RP2 521 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 TYSND1Q2T9J0 566 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 OR2T5Q6IEZ7 315 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 FAM217AQ8IXS0 508 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 TMEM132CQ8N3T6 1108 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 OR2T29Q8NH02 315 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 LKAAEAR1Q8TD35 194 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 MAL2Q969L2 176 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 PANX1Q96RD7 426 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 ZNF300Q96RE9 604 aaPredicted RBP9.53□□□□□ -0.88
CSMD2-203ENST00000373377 SH3GL1Q99961 368 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 PRRG3Q9BZD7 231 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 CEP44Q9C0F1 390 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 NECTIN3Q9NQS3 549 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 HEBP1Q9NRV9 189 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 KIAA1522Q9P206 1035 aaPredicted RBP9.53□□□□□ -0.88
CSMD2-203ENST00000373377 AGO1Q9UL18 857 aaKnown RBP9.53□□□□□ -0.88
CSMD2-203ENST00000373377 PADI3Q9ULW8 664 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 NINQ8N4C6 2090 aa9.53□□□□□ -0.88
CSMD2-203ENST00000373377 SMIM30A4D0T7 59 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 PDZK1P1A8MUH7 402 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 EVPLLA8MZ36 301 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 ANKRD28O15084 1053 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 INSIG1O15503 277 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 PCDHGA12O60330 932 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 PRAMEF11O60813 436 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 UPK1BO75841 260 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 CA8P35219 290 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 HUNKP57058 714 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 IRF5Q13568 498 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 PCBP1Q15365 356 aaKnown RBP eCLIP9.52□□□□□ -0.88
CSMD2-203ENST00000373377 MED22Q15528 200 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.52□□□□□ -0.88
CSMD2-203ENST00000373377 CACTIN-AS1Q8N1I8 211 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 GPR150Q8NGU9 434 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 DNASE1L2Q92874 299 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 BBS2Q9BXC9 721 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 REEP1Q9H902 201 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 GPR83Q9NYM4 423 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 EHD3Q9NZN3 535 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 NEUROG3Q9Y4Z2 214 aa9.52□□□□□ -0.88
CSMD2-203ENST00000373377 HTTP42858 3142 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 AP3D1O14617 1153 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 TACR2P21452 398 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 S100A1P23297 94 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 EIF2DP41214 584 aaKnown RBP9.52□□□□□ -0.89
CSMD2-203ENST00000373377 RACK1P63244 317 aaKnown RBP9.52□□□□□ -0.89
CSMD2-203ENST00000373377 LRIT3Q3SXY7 679 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 TRIM60Q495X7 471 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 SPATS1Q496A3 300 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 RUNDC3AQ59EK9 446 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 STX19Q8N4C7 294 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 SVOPQ8N4V2 548 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 PJA1Q8NG27 643 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 YIPF6Q96EC8 236 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms