RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 GPR107Q5VW38 600 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 SPESP1Q6UW49 350 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 GDPD4Q6W3E5 623 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 TOX2Q96NM4 488 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 AMBRA1Q9C0C7 1298 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 LTBP2Q14767 1821 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 CREG1O75629 220 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 HIST1H2AGP0C0S8 130 aaPredicted RBP23.17■■□□□ 1.3
CDK9-201ENST00000373264 LINC00271P0C7V0 271 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 THRBP10828 461 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 HIST1H2ADP20671 130 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 STT3AP46977 705 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 PREPP48147 710 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 CLDN8P56748 225 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 PFN3P60673 137 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 CYP2U1Q7Z449 544 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 OR7A2PQ8NGA2 310 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 CDC26Q8NHZ8 85 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 HIST1H2AHQ96KK5 128 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 MTERF1Q99551 399 aaKnown RBP23.17■■□□□ 1.3
CDK9-201ENST00000373264 HIST1H2AJQ99878 128 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 H2AFJQ9BTM1 129 aa23.17■■□□□ 1.3
CDK9-201ENST00000373264 CPEB1Q9BZB8 566 aaKnown RBP23.17■■□□□ 1.3
CDK9-201ENST00000373264 TRIM43BA6NCK2 446 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 NUAK1O60285 661 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 ATE1O95260 518 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 CTSLP07711 333 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 PIGFQ07326 219 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 CHIT1Q13231 466 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 ZBED5Q49AG3 693 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 ARSIQ5FYB1 569 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 LY6G5CQ5SRR4 150 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 TMEM26Q6ZUK4 368 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 PLPP6Q8IY26 295 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 FRS2Q8WU20 508 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 TRIM43Q96BQ3 446 aaPredicted RBP23.16■■□□□ 1.3
CDK9-201ENST00000373264 ITCHQ96J02 903 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 MBOAT4Q96T53 435 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 RIOK2Q9BVS4 552 aaKnown RBP23.16■■□□□ 1.3
CDK9-201ENST00000373264 CXorf21Q9HAI6 301 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.16■■□□□ 1.3
CDK9-201ENST00000373264 ASIC5Q9NY37 505 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 NOTCH4Q99466 2003 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.16■■□□□ 1.3
CDK9-201ENST00000373264 LRRC70Q7Z2Q7 622 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 ZDHHC13Q8IUH4 622 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 FAM120BQ96EK7 910 aaKnown RBP23.16■■□□□ 1.3
CDK9-201ENST00000373264 C19orf43Q9BQ61 176 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 UGT2B28Q9BY64 529 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 VNN3Q9NY84 501 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 WNT6Q9Y6F9 365 aa23.16■■□□□ 1.3
CDK9-201ENST00000373264 PTPRSQ13332 1948 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 GFYI3L273 518 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 MOSPD3O75425 235 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 CTSCP53634 463 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 CES5AQ6NT32 575 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 METTL3Q86U44 580 aaKnown RBP23.15■■□□□ 1.3
CDK9-201ENST00000373264 ERI1Q8IV48 349 aaKnown RBP23.15■■□□□ 1.3
CDK9-201ENST00000373264 ST13P5Q8NFI4 369 aaPredicted RBP23.15■■□□□ 1.3
CDK9-201ENST00000373264 BARD1Q99728 777 aaKnown RBP23.15■■□□□ 1.3
CDK9-201ENST00000373264 PCDH12Q9NPG4 1184 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 TUBA8Q9NY65 449 aaPredicted RBP23.15■■□□□ 1.3
CDK9-201ENST00000373264 ITM2BQ9Y287 266 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 CHD9Q3L8U1 2897 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 KIAA0100Q14667 2235 aaKnown RBP23.15■■□□□ 1.3
CDK9-201ENST00000373264 GNGT2O14610 69 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 CLTBP09497 229 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 HOXB9P17482 250 aaPredicted RBP23.15■■□□□ 1.3
CDK9-201ENST00000373264 PFKLP17858 780 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 EEF1B2P24534 225 aaKnown RBP23.15■■□□□ 1.3
CDK9-201ENST00000373264 C16orf72Q14CZ0 275 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 TMEM259Q4ZIN3 620 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 DOK6Q6PKX4 331 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 RNF165Q6ZSG1 346 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 ZBTB46Q86UZ6 589 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 PNPT1Q8TCS8 783 aaKnown RBP23.15■■□□□ 1.3
CDK9-201ENST00000373264 ADAMTS16Q8TE57 1224 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 ZSWIM3Q96MP5 696 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 FAM83DQ9H4H8 585 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 DCAF13Q9NV06 445 aaKnown RBP23.15■■□□□ 1.3
CDK9-201ENST00000373264 SNX6Q9UNH7 406 aa23.15■■□□□ 1.3
CDK9-201ENST00000373264 YY2O15391 372 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 C8GP07360 202 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 PTPN5P54829 565 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 SPIDRQ14159 915 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 CBX2Q14781 532 aaPredicted RBP23.14■■□□□ 1.29
CDK9-201ENST00000373264 SMU1Q2TAY7 513 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 RBM23Q86U06 439 aaKnown RBP23.14■■□□□ 1.29
CDK9-201ENST00000373264 GPR180Q86V85 440 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 CALHM3Q86XJ0 350 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 GAB3Q8WWW8 586 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 ZNF641Q96N77 438 aaPredicted RBP23.14■■□□□ 1.29
CDK9-201ENST00000373264 PKD2L2Q9NZM6 624 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 DNAJB9Q9UBS3 223 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 PCDHGA8Q9Y5G5 932 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 RANBP2P49792 3224 aaKnown RBP23.14■■□□□ 1.29
CDK9-201ENST00000373264 E7EQ34 232 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 AMD1P17707 334 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 METAP1P53582 386 aa23.14■■□□□ 1.29
CDK9-201ENST00000373264 PRMT2P55345 433 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms