RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 ERV3-1Q14264 604 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 HIF1AQ16665 826 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 DEFB109BQ30KR1 87 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 TTLL9Q3SXZ7 439 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 FAM198BQ6UWH4 519 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 SYTL1Q8IYJ3 562 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 GPR135Q8IZ08 494 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 N4BP2L2Q92802 583 aaPredicted RBP21.82■■□□□ 1.08
COL9A2-201ENST00000372736 CERS2Q96G23 380 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 TRIM31Q9BZY9 425 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 CHMP2BQ9UQN3 213 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 DHRS7Q9Y394 339 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 TEX264Q9Y6I9 313 aa21.82■■□□□ 1.08
COL9A2-201ENST00000372736 GCN1Q92616 2671 aaKnown RBP21.82■■□□□ 1.08
COL9A2-201ENST00000372736 A0A1W2PPV9 198 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 MYO1CO00159 1063 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 OR2B3O76000 313 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 KLK3P07288 261 aaPredicted RBP21.81■■□□□ 1.08
COL9A2-201ENST00000372736 GABRB3P28472 473 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 PTPN4P29074 926 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 CCR10P46092 362 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 CYP2A13Q16696 494 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 HP1BP3Q5SSJ5 553 aaPredicted RBP21.81■■□□□ 1.08
COL9A2-201ENST00000372736 ZNF385CQ66K41 422 aaPredicted RBP21.81■■□□□ 1.08
COL9A2-201ENST00000372736 STEAP4Q687X5 459 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 FCRL6Q6DN72 434 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 RAB42Q8N4Z0 105 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 CFAP36Q96G28 342 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 SPRTNQ9H040 489 aaPredicted RBP21.81■■□□□ 1.08
COL9A2-201ENST00000372736 GEMIN8Q9NWZ8 242 aaKnown RBP21.81■■□□□ 1.08
COL9A2-201ENST00000372736 SLC17A6Q9P2U8 582 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 PLCL2Q9UPR0 1127 aa21.81■■□□□ 1.08
COL9A2-201ENST00000372736 BAHCC1Q9P281 2608 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 EFCAB8A8MWE9 144 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 ZSCAN9O15535 394 aaPredicted RBP21.8■■□□□ 1.08
COL9A2-201ENST00000372736 FKBP9O95302 570 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 RECKO95980 971 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 CAPN1P07384 714 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 ENO3P13929 434 aaPredicted RBP21.8■■□□□ 1.08
COL9A2-201ENST00000372736 RPL21P46778 160 aaKnown RBP21.8■■□□□ 1.08
COL9A2-201ENST00000372736 ETF1P62495 437 aaKnown RBP21.8■■□□□ 1.08
COL9A2-201ENST00000372736 TIAL1Q01085 375 aaKnown RBP eCLIP21.8■■□□□ 1.08
COL9A2-201ENST00000372736 FASTKQ14296 549 aaKnown RBP21.8■■□□□ 1.08
COL9A2-201ENST00000372736 SF1Q15637 639 aaKnown RBP21.8■■□□□ 1.08
COL9A2-201ENST00000372736 PTCHD3Q3KNS1 767 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 OR9A1PQ8NGU1 263 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 INPP5DQ92835 1189 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 LRRC39Q96DD0 335 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 NDNQ99608 321 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 ADNPQ9H2P0 1102 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 FAM114A2Q9NRY5 505 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 STARD5Q9NSY2 213 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 INTS7Q9NVH2 962 aaKnown RBP21.8■■□□□ 1.08
COL9A2-201ENST00000372736 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.8■■□□□ 1.08
COL9A2-201ENST00000372736 ZC3H7BQ9UGR2 993 aaKnown RBP21.8■■□□□ 1.08
COL9A2-201ENST00000372736 AP1M2Q9Y6Q5 423 aa21.8■■□□□ 1.08
COL9A2-201ENST00000372736 CDC14CA4D256 554 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 CATP04040 527 aaKnown RBP21.79■■□□□ 1.08
COL9A2-201ENST00000372736 HBQ1P09105 142 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 MPC1LP0DKB6 136 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 ARL4CP56559 192 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 RPS15P62841 145 aaKnown RBP21.79■■□□□ 1.08
COL9A2-201ENST00000372736 MRPS25P82663 173 aaKnown RBP21.79■■□□□ 1.08
COL9A2-201ENST00000372736 KCNAB2Q13303 367 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 IL10RAQ13651 578 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 TRMT10BQ6PF06 316 aaKnown RBP21.79■■□□□ 1.08
COL9A2-201ENST00000372736 FIGLAQ6QHK4 219 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 KIAA0408Q6ZU52 694 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 GALNT7Q86SF2 657 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 CPNE9Q8IYJ1 553 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 ENDOVQ8N8Q3 282 aaKnown RBP21.79■■□□□ 1.08
COL9A2-201ENST00000372736 SPATA4Q8NEY3 305 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 OR2L3Q8NG85 312 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 OR2A1Q8NGT9 310 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 GABPB2Q8TAK5 448 aaPredicted RBP21.79■■□□□ 1.08
COL9A2-201ENST00000372736 FAM117AQ9C073 453 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 SLC7A5P2Q9GIP4 190 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 EURLQ9NYK6 297 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 POLHQ9Y253 713 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 KLK4Q9Y5K2 254 aa21.79■■□□□ 1.08
COL9A2-201ENST00000372736 HELZ2Q9BYK8 2649 aaKnown RBP21.79■■□□□ 1.08
COL9A2-201ENST00000372736 BSNQ9UPA5 3926 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 VPS26AO75436 327 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 RAB40ALP0C0E4 278 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 CBSLP0DN79 551 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 SFTPCP11686 197 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 CASQ1P31415 396 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 CBSP35520 551 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 GRIA3P42263 894 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 GCGRP47871 477 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 CARSP49589 748 aaKnown RBP21.78■■□□□ 1.08
COL9A2-201ENST00000372736 RBM20Q5T481 1227 aaKnown RBP21.78■■□□□ 1.08
COL9A2-201ENST00000372736 RHBDD2Q6NTF9 364 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 SYT10Q6XYQ8 523 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 CYHR1Q6ZMK1 362 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 PIWIL4Q7Z3Z4 852 aaKnown RBP21.78■■□□□ 1.08
COL9A2-201ENST00000372736 SYVN1Q86TM6 617 aa21.78■■□□□ 1.08
COL9A2-201ENST00000372736 ZNF655Q8N720 491 aaPredicted RBP21.78■■□□□ 1.08
COL9A2-201ENST00000372736 FBXO15Q8NCQ5 510 aaPredicted RBP21.78■■□□□ 1.08
COL9A2-201ENST00000372736 APOBEC4Q8WW27 367 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms