RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 MATN4O95460 622 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 ELFN1P0C7U0 828 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 RPL10P27635 214 aaKnown RBP16.65■□□□□ 0.26
VEGFA-205ENST00000372067 IL12AP29459 219 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 OXTRP30559 389 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 CLK3P49761 638 aaKnown RBP16.65■□□□□ 0.26
VEGFA-205ENST00000372067 OR4D2P58180 307 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 STARD3Q14849 445 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 ASTLQ6HA08 431 aaPredicted RBP16.65■□□□□ 0.26
VEGFA-205ENST00000372067 TMC5Q6UXY8 1006 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 PHYKPLQ8IUZ5 450 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 CPXM2Q8N436 756 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 MINDY1Q8N5J2 469 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 C12orf43Q96C57 262 aaKnown RBP16.65■□□□□ 0.26
VEGFA-205ENST00000372067 ISOC1Q96CN7 298 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 ZFYVE19Q96K21 471 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 ZIM2Q9NZV7 527 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 OAZ3Q9UMX2 235 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 INVSQ9Y283 1065 aa16.65■□□□□ 0.26
VEGFA-205ENST00000372067 FRMPD3Q5JV73 1810 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 PSMD11O00231 422 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 KMOO15229 486 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 EMX2Q04743 252 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 PRKCQQ04759 706 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 FNDC3BQ53EP0 1204 aaKnown RBP16.64■□□□□ 0.25
VEGFA-205ENST00000372067 GPR180Q86V85 440 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 PROKR1Q8TCW9 393 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 RHBDF1Q96CC6 855 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 CD300AQ9UGN4 299 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 STOML2Q9UJZ1 356 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 CLOCKO15516 846 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 TAPBPO15533 448 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 DFNA5O60443 496 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 PREPP48147 710 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 PTSQ03393 145 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 PPP1R8Q12972 351 aaKnown RBP16.64■□□□□ 0.25
VEGFA-205ENST00000372067 MAD2L1Q13257 205 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-205ENST00000372067 PCBP2Q15366 365 aaKnown RBP eCLIP16.64■□□□□ 0.251e-10■■□□□ 11.4
VEGFA-205ENST00000372067 HACD2Q6Y1H2 254 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 TRAPPC5Q8IUR0 188 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 SLC13A3Q8WWT9 602 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 SNX19Q92543 992 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 FAM120BQ96EK7 910 aaKnown RBP16.64■□□□□ 0.25
VEGFA-205ENST00000372067 PLXNA3P51805 1871 aa16.64■□□□□ 0.25
VEGFA-205ENST00000372067 MANBAO00462 879 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 CLIC3O95833 236 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 HLA-EP13747 358 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 ATP1B2P14415 290 aaPredicted RBP16.63■□□□□ 0.25
VEGFA-205ENST00000372067 CHIT1Q13231 466 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 XKR6Q5GH73 641 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 STK32CQ86UX6 486 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 MMAAQ8IVH4 418 aaKnown RBP16.63■□□□□ 0.25
VEGFA-205ENST00000372067 TMEM102Q8N9M5 508 aaPredicted RBP16.63■□□□□ 0.25
VEGFA-205ENST00000372067 STON2Q8WXE9 905 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 BADQ92934 168 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 TMEM125Q96AQ2 219 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 FOPNLQ96NB1 174 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 ACTR3BQ9P1U1 418 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 PCM1Q15154 2024 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 GREM1O60565 184 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 ICMTO60725 284 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 BMPR1AP36894 532 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 SPINT3P49223 89 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 TRAF3Q13114 568 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 NAE1Q13564 534 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 RCAN2Q14206 197 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 TMC8Q8IU68 726 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 HID1Q8IV36 788 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 SYTL1Q8IYJ3 562 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 SLC15A4Q8N697 577 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 AP2M1Q96CW1 435 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 AURKBQ96GD4 344 aaPredicted RBP16.63■□□□□ 0.25
VEGFA-205ENST00000372067 MTERF1Q99551 399 aaKnown RBP16.63■□□□□ 0.25
VEGFA-205ENST00000372067 IRF2BPLQ9H1B7 796 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 PCDH12Q9NPG4 1184 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 DYRK4Q9NR20 520 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 SNX6Q9UNH7 406 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 PDE10AQ9Y233 779 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 IFT52Q9Y366 437 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 C8BP07358 591 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 ERAP2Q6P179 960 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 BTLAQ7Z6A9 289 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 SLC22A15Q8IZD6 547 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 OFCC1Q8IZS5 231 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 OR2T12Q8NG77 320 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 OR10Q1Q8NGQ4 319 aa16.63■□□□□ 0.25
VEGFA-205ENST00000372067 DNMT3BQ9UBC3 853 aaKnown RBP16.63■□□□□ 0.25
VEGFA-205ENST00000372067 PRR23AA6NEV1 266 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 FXYD1O00168 92 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 RPS3P23396 243 aaKnown RBP eCLIP16.62■□□□□ 0.254e-8■□□□□ 10.7
VEGFA-205ENST00000372067 CXCR2P25025 360 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 MPP7Q5T2T1 576 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 MACC1Q6ZN28 852 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 ERMP1Q7Z2K6 904 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 HSD11B1LQ7Z5J1 315 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 RNF175Q8N4F7 328 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 GPR156Q8NFN8 814 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 TSPAN14Q8NG11 270 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 SUN5Q8TC36 379 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 RMND5BQ96G75 393 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms