RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 LURAP1LQ8IV03 231 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 KRT222Q8N1A0 295 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 CISD2Q8N5K1 135 aaKnown RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 C2orf73Q8N5S3 287 aaPredicted RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 CFAP61Q8NHU2 1237 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 PRR7Q8TB68 274 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 UBE2Q2Q8WVN8 375 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 TM9SF4Q92544 642 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 INPP5DQ92835 1189 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 ZNF285Q96NJ3 590 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 BARD1Q99728 777 aaKnown RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 P2RY12Q9H244 342 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 SLC26A1Q9H2B4 701 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 WDR54Q9H977 334 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 ZBTB20Q9HC78 741 aaPredicted RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 CHRAC1Q9NRG0 131 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 CATSPERZQ9NTU4 200 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 INTS7Q9NVH2 962 aaKnown RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 MARCH4Q9P2E8 410 aaPredicted RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 TARM1B6A8C7 271 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 DSCR3O14972 297 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 CD3EAPO15446 510 aaKnown RBP15.36■□□□□ 0.05
CKS1B-202ENST00000368436 FKBP9O95302 570 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 APRTP07741 180 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 PIM1P11309 404 aaPredicted RBP15.36■□□□□ 0.05
CKS1B-202ENST00000368436 TTPAP49638 278 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 NR6A1Q15406 480 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 SF1Q15637 639 aaKnown RBP15.36■□□□□ 0.05
CKS1B-202ENST00000368436 NKG7Q16617 165 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 TCTE1Q5JU00 501 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 PCID2Q5JVF3 399 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 SEL1L2Q5TEA6 688 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 COX15Q7KZN9 410 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 ZADH2Q8N4Q0 377 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 PPHLN1Q8NEY8 458 aaKnown RBP15.36■□□□□ 0.05
CKS1B-202ENST00000368436 C1orf54Q8WWF1 131 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 ZUFSPQ96AP4 578 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 SPSB2Q99619 263 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 ILKAPQ9H0C8 392 aaPredicted RBP15.36■□□□□ 0.05
CKS1B-202ENST00000368436 TREX1Q9NSU2 369 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 PAK5Q9P286 719 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 CIDEBQ9UHD4 219 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 ANAPC5Q9UJX4 755 aa15.36■□□□□ 0.05
CKS1B-202ENST00000368436 TEX15Q9BXT5 2789 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 FITM1A5D6W6 292 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 SOCS6O14544 535 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 MCM3P25205 808 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 RPL22P35268 128 aaKnown RBP15.35■□□□□ 0.05
CKS1B-202ENST00000368436 GRIA3P42263 894 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 SNX1Q13596 522 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 GRM7Q14831 915 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 TMED2Q15363 201 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 IGFL2Q6UWQ7 119 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 TAX1BP1Q86VP1 789 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 HMGCLL1Q8TB92 370 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 RAD51AP1Q96B01 352 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 PANX3Q96QZ0 392 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 RAB11FIP5Q9BXF6 653 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 SLC6A20Q9NP91 592 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 EIF2B3Q9NR50 452 aaKnown RBP15.35■□□□□ 0.05
CKS1B-202ENST00000368436 CUTCQ9NTM9 273 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 IL1RAPL1Q9NZN1 696 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 ERRFI1Q9UJM3 462 aaPredicted RBP15.35■□□□□ 0.05
CKS1B-202ENST00000368436 FBXL4Q9UKA2 621 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 SLC39A10Q9ULF5 831 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 PCDHGA10Q9Y5H3 936 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 KLK4Q9Y5K2 254 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 MDC1Q14676 2089 aaKnown RBP15.35■□□□□ 0.05
CKS1B-202ENST00000368436 UNC79Q9P2D8 2635 aa15.35■□□□□ 0.05
CKS1B-202ENST00000368436 KPNA5O15131 536 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 SRPX2O60687 465 aaPredicted RBP15.34■□□□□ 0.05
CKS1B-202ENST00000368436 C1orf105O95561 183 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 ZSCAN5DPP0CG00 497 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 RPS3P23396 243 aaKnown RBP eCLIP15.34■□□□□ 0.059e-9■■■■■ 29
CKS1B-202ENST00000368436 SIX1Q15475 284 aaPredicted RBP15.34■□□□□ 0.05
CKS1B-202ENST00000368436 CCSMST1Q4G0I0 132 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 PRAMEF13Q5VWM6 474 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 PTRHD1Q6GMV3 140 aaKnown RBP15.34■□□□□ 0.05
CKS1B-202ENST00000368436 TTC23LQ6PF05 361 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 KIRREL2Q6UWL6 708 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 CUZD1Q86UP6 607 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 LRRC6Q86X45 466 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 MPP5Q8N3R9 675 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 CCDC89Q8N998 374 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.34■□□□□ 0.05
CKS1B-202ENST00000368436 SELENOSQ9BQE4 189 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 MRM3Q9HC36 420 aaKnown RBP15.34■□□□□ 0.05
CKS1B-202ENST00000368436 GNPTGQ9UJJ9 305 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 CDC23Q9UJX2 597 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 NXT1Q9UKK6 140 aaKnown RBP15.34■□□□□ 0.05
CKS1B-202ENST00000368436 NTNG1Q9Y2I2 539 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 MRFAP1Q9Y605 127 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 HS3ST3B1Q9Y662 390 aa15.34■□□□□ 0.05
CKS1B-202ENST00000368436 COPG1Q9Y678 874 aaKnown RBP15.34■□□□□ 0.05
CKS1B-202ENST00000368436 VSTM2BA6NLU5 285 aa15.33■□□□□ 0.04
CKS1B-202ENST00000368436 CTSVO60911 334 aa15.33■□□□□ 0.04
CKS1B-202ENST00000368436 LDLRP01130 860 aa15.33■□□□□ 0.04
CKS1B-202ENST00000368436 ITGA3P26006 1051 aa15.33■□□□□ 0.04
CKS1B-202ENST00000368436 NPY2RP49146 381 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms