RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 KLHL33A6NCF5 533 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 PABPN1LA6NDY0 278 aaKnown RBP17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF701M0R085 212 aaPredicted RBP17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 RFXANKO14593 260 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 PER2O15055 1255 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 ATP1B2P14415 290 aaPredicted RBP17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 EFNA1P20827 205 aaPredicted RBP17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 AGXTP21549 392 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 CRHBPP24387 322 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 DCTP40126 519 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 TTC23Q5W5X9 447 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 METTL2BQ6P1Q9 378 aaKnown RBP17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF555Q8NEP9 628 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 FOXJ1Q92949 421 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 PRM3Q9NNZ6 103 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 KCNE1BA0A087WTH5 132 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 OR2AG2A6NM03 316 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF682O95780 498 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 LRG1P02750 347 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 GZMMP51124 257 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 SLC7A9P82251 487 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 TMED1Q13445 227 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 DDX39BQ13838 428 aaKnown RBP17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 CTU2Q2VPK5 515 aaKnown RBP17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 XKR5Q6UX68 686 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 RNF165Q6ZSG1 346 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 A0A096LPI6 279 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 TRAV19A0A0A6YYK7 116 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 C16orf96A6NNT2 1141 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 PTGES3LE9PB15 166 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 NEDD8-MDP1E9PL57 170 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 PTPN6P29350 595 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 TTKP33981 857 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 CHIT1Q13231 466 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 CARD16Q5EG05 197 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 BROXQ5VW32 411 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 KLHL35Q6PF15 583 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 LRRC70Q7Z2Q7 622 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 CALHM3Q86XJ0 350 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 TMC8Q8IU68 726 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 ADHFE1Q8IWW8 467 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 OR7A2PQ8NGA2 310 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 C19orf43Q9BQ61 176 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 RMND5AQ9H871 391 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 HS3ST2Q9Y278 367 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 TRIM17Q9Y577 477 aa17.6■□□□□ 0.41
UBQLN4-201ENST00000368309 MAGEB3O15480 346 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF182P17025 639 aaPredicted RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 LRIF1Q5T3J3 769 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 CYP2U1Q7Z449 544 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF420Q8TAQ5 688 aaPredicted RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 ELMO1Q92556 727 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF689Q96CS4 500 aaPredicted RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 MCCC1Q96RQ3 725 aaPredicted RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 MTERF1Q99551 399 aaKnown RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 RBM4BQ9BQ04 359 aaKnown RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 RBM4Q9BWF3 364 aaKnown RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 POP4O95707 220 aaKnown RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 RETP07949 1114 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 NRIP1P48552 1158 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 PTPN5P54829 565 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 CD47Q08722 323 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 BNIP3Q12983 259 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 POM121L1PQ3SYA9 428 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 FRG2Q64ET8 278 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 XAF1Q6GPH4 301 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 GALNT5Q7Z7M9 940 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 METTL3Q86U44 580 aaKnown RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 PLPP6Q8IY26 295 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 EID3Q8N140 333 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 SNX19Q92543 992 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 LMLNQ96KR4 655 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 FRG2BQ96QU4 278 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 BARD1Q99728 777 aaKnown RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 LHPPQ9H008 270 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 HCFC1R1Q9NWW0 138 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 IGLV3-16A0A075B6K0 115 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 PFDN1O60925 122 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 MITFO75030 526 aaPredicted RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 HPRP00739 348 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 C8GP07360 202 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 PRPS2P11908 318 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 SLC6A12P48065 614 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 IL1RL1Q01638 556 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 ABRQ12979 859 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 C6orf141Q5SZD1 244 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 NOXRED1Q6NXP6 359 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 CNKSR3Q6P9H4 555 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 ELMSAN1Q6PJG2 1045 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 Q6ZVL8 140 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 CHDHQ8NE62 594 aaPredicted RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 OR13F1Q8NGS4 319 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 ABTB1Q969K4 478 aaPredicted RBP17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 PYURFQ96I23 114 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 DOK1Q99704 481 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 VNN3Q9NY84 501 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF510Q9Y2H8 683 aa17.59■□□□□ 0.41
UBQLN4-201ENST00000368309 MYO7AQ13402 2215 aa17.58■□□□□ 0.41
UBQLN4-201ENST00000368309 TMEM202A6NGA9 273 aa17.58■□□□□ 0.41
UBQLN4-201ENST00000368309 FAM220BPB1ANY3 271 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms