RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MED26O95402 600 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 FTLP02792 175 aaPredicted RBP13.95□□□□□ -0.18
VAMP4-202ENST00000367740 TPBGLP0DKB5 382 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 FERP16591 822 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 CHRNB4P30926 498 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 KRT31Q15323 416 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 FKBP15Q5T1M5 1219 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 YOD1Q5VVQ6 348 aaPredicted RBP13.95□□□□□ -0.18
VAMP4-202ENST00000367740 CCDC70Q6NSX1 233 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 GLT6D1Q7Z4J2 308 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 IRF2BP2Q7Z5L9 587 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 LAPTM4BQ86VI4 370 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 NIPA2Q8N8Q9 360 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 MDS2Q8NDY4 140 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 OR5AR1Q8NGP9 310 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 ZNF398Q8TD17 642 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 TFGQ92734 400 aaPredicted RBP13.95□□□□□ -0.18
VAMP4-202ENST00000367740 HDAC10Q969S8 669 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 MBD6Q96DN6 1003 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 RMND5BQ96G75 393 aaPredicted RBP13.95□□□□□ -0.18
VAMP4-202ENST00000367740 SIGLEC12Q96PQ1 595 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 ZNF670Q9BS34 389 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 KLHL1Q9NR64 748 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 ENAMQ9NRM1 1142 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 UBP1Q9NZI7 540 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 IL1RAPL1Q9NZN1 696 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 LRFN1Q9P244 771 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 RNF6Q9Y252 685 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 PHF3Q92576 2039 aaKnown RBP13.95□□□□□ -0.18
VAMP4-202ENST00000367740 SCN2AQ99250 2005 aa13.95□□□□□ -0.18
VAMP4-202ENST00000367740 FAM237BA0A1B0GVD1 139 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 CHRNA4P43681 627 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 OCA2Q04671 838 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 PIGHQ14442 188 aaPredicted RBP13.94□□□□□ -0.18
VAMP4-202ENST00000367740 PTPRCAPQ14761 206 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 GRM7Q14831 915 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 SIRPB2Q5JXA9 342 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 FAF2Q96CS3 445 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 SCMH1Q96GD3 660 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 BTBD6Q96KE9 485 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 ZNF285Q96NJ3 590 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 GPATCH1Q9BRR8 931 aaKnown RBP13.94□□□□□ -0.18
VAMP4-202ENST00000367740 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 ZNF304Q9HCX3 659 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 MRPL47Q9HD33 250 aaKnown RBP13.94□□□□□ -0.18
VAMP4-202ENST00000367740 KCNJ16Q9NPI9 418 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 STMN3Q9NZ72 180 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 ZNF282Q9UDV7 671 aaPredicted RBP13.94□□□□□ -0.18
VAMP4-202ENST00000367740 PKP3Q9Y446 797 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 TLN2Q9Y4G6 2542 aa13.94□□□□□ -0.18
VAMP4-202ENST00000367740 IGLV3-12A0A075B6K2 115 aa13.93□□□□□ -0.18
VAMP4-202ENST00000367740 FITM1A5D6W6 292 aa13.93□□□□□ -0.18
VAMP4-202ENST00000367740 ISM1B1AKI9 464 aa13.93□□□□□ -0.18
VAMP4-202ENST00000367740 IDSB3KWA1 339 aa13.93□□□□□ -0.18
VAMP4-202ENST00000367740 DGKQP52824 942 aa13.93□□□□□ -0.18
VAMP4-202ENST00000367740 BEST3Q8N1M1 668 aa13.93□□□□□ -0.18
VAMP4-202ENST00000367740 TTC29Q8NA56 475 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-202ENST00000367740 BLOC1S5Q8TDH9 187 aa13.93□□□□□ -0.18
VAMP4-202ENST00000367740 RNF25Q96BH1 459 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-202ENST00000367740 CLEC4MQ9H2X3 399 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-202ENST00000367740 OR6C2Q9NZP2 312 aa13.93□□□□□ -0.18
VAMP4-202ENST00000367740 HACD3Q9P035 362 aa13.93□□□□□ -0.18
VAMP4-202ENST00000367740 L3MBTL1Q9Y468 752 aa13.93□□□□□ -0.18
VAMP4-202ENST00000367740 LOC285095A0A1B0GVY8 99 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 KLK8O60259 260 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 CXCR2P25025 360 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 PCSK6P29122 969 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 EEF1DP29692 281 aaKnown RBP13.92□□□□□ -0.18
VAMP4-202ENST00000367740 GJC1P36383 396 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 AP1B1Q10567 949 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 TUBA3CQ13748 450 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 KIR2DS3Q14952 304 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 TCTE1Q5JU00 501 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 TUBA3EQ6PEY2 450 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 KDELC1Q6UW63 502 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 NAPRTQ6XQN6 538 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 CD163Q86VB7 1156 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 DCUN1D1Q96GG9 259 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 ZNF830Q96NB3 372 aaPredicted RBP13.92□□□□□ -0.18
VAMP4-202ENST00000367740 ZNF700Q9H0M5 742 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 ASB8Q9H765 288 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 GLOD4Q9HC38 313 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 TEKT2Q9UIF3 430 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 PLAGL1Q9UM63 463 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 HRH3Q9Y5N1 445 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 CUBNO60494 3623 aa13.92□□□□□ -0.18
VAMP4-202ENST00000367740 LOC102723996A0A087X1L8 192 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 SRP72O76094 671 aaKnown RBP13.91□□□□□ -0.18
VAMP4-202ENST00000367740 LY6G6DO95868 133 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 CCDC172P0C7W6 258 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 GZMAP12544 262 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 HOXC12P31275 282 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 PTGER1P34995 402 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 GRIA3P42263 894 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 ST13P50502 369 aaKnown RBP13.91□□□□□ -0.18
VAMP4-202ENST00000367740 EMP2P54851 167 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 AP2B1P63010 937 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 RPA4Q13156 261 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 RNFT1Q5M7Z0 435 aa13.91□□□□□ -0.18
VAMP4-202ENST00000367740 CDKAL1Q5VV42 579 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms