RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 PRSS23O95084 383 aa12.02□□□□□ -0.48
PTPN7-202ENST00000367279 TRBC1P01850 177 aa12.02□□□□□ -0.48
PTPN7-202ENST00000367279 HMGA1P17096 107 aaKnown RBP12.02□□□□□ -0.48
PTPN7-202ENST00000367279 VBP1P61758 197 aa12.02□□□□□ -0.48
PTPN7-202ENST00000367279 SLC14A1Q13336 389 aa12.02□□□□□ -0.48
PTPN7-202ENST00000367279 FXNQ16595 210 aa12.02□□□□□ -0.48
PTPN7-202ENST00000367279 SMN1Q16637 294 aaKnown RBP12.02□□□□□ -0.48
PTPN7-202ENST00000367279 TRAF7Q6Q0C0 670 aa12.02□□□□□ -0.48
PTPN7-202ENST00000367279 ZNF540Q8NDQ6 660 aa12.02□□□□□ -0.48
PTPN7-202ENST00000367279 CCDC115Q96NT0 180 aa12.02□□□□□ -0.48
PTPN7-202ENST00000367279 PDP1Q9P0J1 537 aaPredicted RBP12.02□□□□□ -0.48
PTPN7-202ENST00000367279 SLC22A14Q9Y267 594 aa12.02□□□□□ -0.48
PTPN7-202ENST00000367279 FUOMA2VDF0 154 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 ZNF99A8MXY4 864 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-202ENST00000367279 GAPDHSO14556 408 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-202ENST00000367279 AXIN1O15169 862 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 FAM20BO75063 409 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 NTRK1P04629 796 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 STK19P49842 368 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-202ENST00000367279 CCL23P55773 120 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 ZXDBP98169 803 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 FPGSQ05932 587 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 SREBF2Q12772 1141 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 SMARCB1Q12824 385 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 CBX3Q13185 183 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 TUBA3CQ13748 450 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 DPY19L1Q2PZI1 675 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 PAGE2BQ5JRK9 111 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 TMEM236Q5W0B7 351 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 SYT12Q8IV01 421 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 HJURPQ8NCD3 748 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-202ENST00000367279 GPR26Q8NDV2 337 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 C2orf49Q9BVC5 232 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-202ENST00000367279 CPQQ9Y646 472 aa12.02□□□□□ -0.49
PTPN7-202ENST00000367279 TMEM247A6NEH6 219 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 CA12O43570 354 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 NADKO95544 446 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 CKMP06732 381 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 SELPP16109 830 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 ZNF12P17014 697 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 JUNBP17275 347 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 CD9P21926 228 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 ISL1P61371 349 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 CDK5R2Q13319 367 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 NPTX1Q15818 432 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 CARD16Q5EG05 197 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 GPRC6AQ5T6X5 926 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 CEP68Q76N32 757 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 GPR149Q86SP6 731 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 HIPK1Q86Z02 1210 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 NPAS4Q8IUM7 802 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 NXPE1Q8N323 547 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 COPS8Q99627 209 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 KLF16Q9BXK1 252 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 RUBCNLQ9H714 662 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 TBCCD1Q9NVR7 557 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 SCN3BQ9NY72 215 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 ZNF510Q9Y2H8 683 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 NPIPB15A6NHN6 443 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 FPGTO14772 594 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 FZD6O60353 706 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 ERN1O75460 977 aaKnown RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 ABCB1P08183 1280 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 AP1S1P61966 158 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 EMX1Q04741 257 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 PTCHD3Q3KNS1 767 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 INO80DQ53TQ3 878 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 NDNFQ8TB73 568 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 MTERF1Q99551 399 aaKnown RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 SLC32A1Q9H598 525 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 ATP13A3Q9H7F0 1226 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 TRPS1Q9UHF7 1281 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 CLEC4EQ9ULY5 219 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 PPT2Q9UMR5 302 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 SNX6Q9UNH7 406 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 SAMHD1Q9Y3Z3 626 aaKnown RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 YIPF1Q9Y548 306 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 A0A1W2PQ45 241 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 A0A1W2PQY0 241 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 COL6A1P12109 1028 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 COX7A2P14406 83 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 CDH3P22223 829 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 GP2P55259 537 aaKnown RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 TOP3AQ13472 1001 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 ATP13A5Q4VNC0 1218 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 ZNF691Q5VV52 312 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 LRRC66Q68CR7 880 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 PDE12Q6L8Q7 609 aaKnown RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 CYP4Z1Q86W10 505 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 RNF168Q8IYW5 571 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 C2orf15Q8WU43 125 aaKnown RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 UBE2FQ969M7 185 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 CPPED1Q9BRF8 314 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-202ENST00000367279 KCNH6Q9H252 994 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 ZDHHC6Q9H6R6 413 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 AASDHPPTQ9NRN7 309 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 KCTD5Q9NXV2 234 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 MTRRQ9UBK8 725 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 FBXO10Q9UK96 956 aa12.01□□□□□ -0.49
PTPN7-202ENST00000367279 ENGP17813 658 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms