RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CFBP00751 764 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ITPKBP27987 946 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 GRAPQ13588 217 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF440Q8IYI8 595 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ECHDC3Q96DC8 303 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CCDC3Q9BQI4 270 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC25A21Q9BQT8 299 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 DUSP12Q9UNI6 340 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM265A0A087WTH1 108 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 HLA-DMAP28067 261 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 DGKQP52824 942 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC26A9Q7LBE3 791 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TCTE3Q8IZS6 198 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 UBA3Q8TBC4 463 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RNF139Q8WU17 664 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF566Q969W8 418 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC35C1Q96A29 364 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC30A3Q99726 388 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PCDH17O14917 1159 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 BNIP3LO60238 219 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PDSS1Q5T2R2 415 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RIPOR1Q6ZS17 1223 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NAXDQ8IW45 347 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 OR13J1Q8NGT2 312 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 OR5J2Q8NH18 312 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 COPS5Q92905 334 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NECAB3Q96P71 396 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC25A32Q9H2D1 315 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 B4GALT5O43286 388 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 IFNA5P01569 189 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 GCP02774 474 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FCER1AP12319 257 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RABGGTBP53611 331 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NIPAL4Q0D2K0 466 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 GRIN2CQ14957 1233 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TRAM2Q15035 370 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PPM1NQ8N819 430 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MIOSQ9NXC5 875 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NDUFAF4Q9P032 175 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TRIM43BA6NCK2 446 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 K7ERI5 159 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 UBOX5O94941 541 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 UBBP0CG47 229 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NUDT6P53370 316 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RPS27AP62979 156 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 UBA52P62987 128 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NSUN2Q08J23 767 aaKnown RBP eCLIP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF630Q2M218 657 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 IER5Q5VY09 327 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 LCN8Q6JVE9 175 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TRAPPC5Q8IUR0 188 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 BRI3BPQ8WY22 251 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MRPS31Q92665 395 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ELOA3CA0A087WX78 387 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 BORCS7-ASMTA0A0B4J1R7 106 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ARVCFO00192 962 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TBX1O43435 398 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 LEPRP48357 1165 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 BAK1Q16611 211 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FAM174BQ3ZCQ3 159 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SLC27A3Q5K4L6 730 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RAP1GAP2Q684P5 730 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 GEMIN6Q8WXD5 167 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF778Q96MU6 729 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ZDHHC8Q9ULC8 765 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 H7C4K7 107 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RGS14O43566 566 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NRP2O60462 931 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PGRP06401 933 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CD44P16070 742 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SHMT1P34896 483 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 QPCTQ16769 361 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM151AQ8N4L1 468 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 EBNA1BP2Q99848 306 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CLIC5Q9NZA1 410 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 HEMK1Q9Y5R4 338 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MAN2B1O00754 1011 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 BIDP55957 195 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TCTAP57738 103 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FCN2Q15485 313 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 C12orf45Q8N5I9 185 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TOR4AQ9NXH8 423 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ABCD2Q9UBJ2 740 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 INVSQ9Y283 1065 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 KCNU1A8MYU2 1149 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MYO1GB0I1T2 1018 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF24P17028 368 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TFEBP19484 476 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 IGFN1Q86VF2 1251 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CEP97Q8IW35 865 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NANPQ8TBE9 248 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 POLR3HQ9Y535 204 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 IQCMA0A1B0GVH7 501 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FAM86B1E9PN63 330 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 IFNW1P05000 195 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 HSPA7P48741 367 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM53Q6P2H8 277 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 DAW1Q8N136 415 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SECISBP2Q96T21 854 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TTLL2Q9BWV7 592 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms