RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ZNF334Q9HCZ1 680 aaPredicted RBP8.47□□□□□ -1.05
SYNE1-206ENST00000367253 KCND1Q9NSA2 647 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ARMCX1Q9P291 453 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 POLHQ9Y253 713 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 KCNIP3Q9Y2W7 256 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 GMPPBQ9Y5P6 360 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ATXN2Q99700 1313 aaKnown RBP8.47□□□□□ -1.05
SYNE1-206ENST00000367253 TRBV23OR9-2A0A075B6M9 112 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ZNF726A6NNF4 738 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 TNFRSF10AO00220 468 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 LILRB3O75022 631 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 OR12D1P0DN82 309 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ANPEPP15144 967 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 RAB3BP20337 219 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 NTSR1P30989 418 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 SSR2P43308 183 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 MAGEB1P43366 347 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 YBEYP58557 167 aaPredicted RBP8.47□□□□□ -1.05
SYNE1-206ENST00000367253 HKDC1Q2TB90 917 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 CYB5R4Q7L1T6 521 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 TBC1D21Q8IYX1 336 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 OR52L1Q8NGH7 329 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ABHD5Q8WTS1 349 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 KCNE4Q8WWG9 221 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 TATDN2Q93075 761 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 LPIN3Q9BQK8 851 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 TMEM246Q9BRR3 403 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 TRIM9Q9C026 710 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 TRPV4Q9HBA0 871 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 SGK2Q9HBY8 427 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 TAS2R1Q9NYW7 299 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ZIM2Q9NZV7 527 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 IFT52Q9Y366 437 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 GRIP1Q9Y3R0 1128 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 OR6C65A6NJZ3 312 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 TRUB2O95900 331 aaKnown RBP8.47□□□□□ -1.05
SYNE1-206ENST00000367253 LCKP06239 509 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ZDHHC11BP0C7U3 371 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 PCMT1P22061 227 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 HTR7P34969 479 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 FOLR3P41439 243 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ARCN1P48444 511 aaKnown RBP8.47□□□□□ -1.05
SYNE1-206ENST00000367253 TNK2Q07912 1038 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 HSPA14Q0VDF9 509 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 CDH17Q12864 832 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ZNF720Q7Z2F6 126 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ECHDC2Q86YB7 292 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.47□□□□□ -1.05
SYNE1-206ENST00000367253 PRSS58Q8IYP2 241 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 CAMKVQ8NCB2 501 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 OR5L2Q8NGL0 311 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ACTRT1Q8TDG2 376 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 DTD1Q8TEA8 209 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 WNT8BQ93098 351 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 EXOC2Q96KP1 924 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 SMURF1Q9HCE7 757 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ZNF69Q9UC07 566 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 HIF3AQ9Y2N7 669 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 YIPF1Q9Y548 306 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 ASB4Q9Y574 426 aa8.47□□□□□ -1.05
SYNE1-206ENST00000367253 A0A1B0GTW7 788 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 B4GAT1O43505 415 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 METTL18O95568 372 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 RLN1P04808 185 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 UGT2B4P06133 528 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 CD46P15529 392 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 TNFSF4P23510 183 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 CCND3P30281 292 aaPredicted RBP8.46□□□□□ -1.05
SYNE1-206ENST00000367253 MAP3K8P41279 467 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 UBE2KP61086 200 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 FRG1Q14331 258 aaKnown RBP8.46□□□□□ -1.05
SYNE1-206ENST00000367253 SEC23AQ15436 765 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 DUOXA1Q1HG43 343 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 RFTN2Q52LD8 501 aaPredicted RBP8.46□□□□□ -1.05
SYNE1-206ENST00000367253 SH3D19Q5HYK7 790 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 VARS2Q5ST30 1063 aaKnown RBP8.46□□□□□ -1.05
SYNE1-206ENST00000367253 SYCE2Q6PIF2 218 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 FBXO39Q8N4B4 442 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 ARL14EPQ8N8R7 260 aaPredicted RBP8.46□□□□□ -1.05
SYNE1-206ENST00000367253 AZIN2Q96A70 460 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 MYO19Q96H55 970 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 BHLHE41Q9C0J9 482 aaPredicted RBP8.46□□□□□ -1.05
SYNE1-206ENST00000367253 KCNH6Q9H252 994 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 SLC39A1Q9NY26 324 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 PTTG2Q9NZH5 202 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 PPP4R1LQ9P1A2 415 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 RAB21Q9UL25 225 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 PCDHGA6Q9Y5G7 932 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 AP4B1Q9Y6B7 739 aa8.46□□□□□ -1.05
SYNE1-206ENST00000367253 A8MU76 341 aa8.46□□□□□ -1.06
SYNE1-206ENST00000367253 H0Y858 1186 aa8.46□□□□□ -1.06
SYNE1-206ENST00000367253 CCNT2O60583 730 aaKnown RBP8.46□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF37AP17032 561 aaPredicted RBP8.46□□□□□ -1.06
SYNE1-206ENST00000367253 EN2P19622 333 aaPredicted RBP8.46□□□□□ -1.06
SYNE1-206ENST00000367253 FOXN2P32314 431 aa8.46□□□□□ -1.06
SYNE1-206ENST00000367253 FXR2P51116 673 aaKnown RBP eCLIP8.46□□□□□ -1.06
SYNE1-206ENST00000367253 MLLT6P55198 1093 aaPredicted RBP8.46□□□□□ -1.06
SYNE1-206ENST00000367253 HTRA3P83110 453 aa8.46□□□□□ -1.06
SYNE1-206ENST00000367253 TAGLNQ01995 201 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms